You are here

Home

ASPNIDRAFT_176194-T1, ASPNIDRAFT_176194-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_176194-T1
Unique NameASPNIDRAFT_176194-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:887653..889125-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_176194-T1 ID=ASPNIDRAFT_176194-T1|Name=ASPNIDRAFT_176194-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1473bp|location=Sequence derived from alignment at ACJE01000021.1:887653..889125- (Aspergillus niger ATCC 1015)
ATGCTAAAGTACTTTTGTATACAGCAATCAGCTGCATTATCACCCTCCCA
AGGACTCGTATCGCCCGAATTGGAAAAAGCAATTCGCACTATTCCCCCAA
AACCTTATACAGGTAAATGTGGCGACGGCTCTTCGTGATAGCCTGCTTAC
TTGTGCGACTTGTGCCAGATACCCTGGTGCAGTACTTTCTGAGTGAGATG
AATGACCAGTACTATTGCCTTTACCCACCGACTTTTTCGCACGACTATGC
GACGTGGTGGTCAGGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTA
CAGCCCTGCTGCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTC
GAGACGCGACAGCAACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCT
TTCCGAGCAGTACCATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGAC
CAGGAAAAGGCGGATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATA
TGGTACAAGACCGAAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGC
TGCAATTCACGAAGCCCAAGAACTAGGTCAGTGTCCTCGTACATCTAGCC
AGTCGGATACTGATCCGGAATAGGAATGCATCGTAGCTCCTCCAAAGCAA
AGGTGTCTGAATTCGAACGGGAGATGCGAAGACGGATATGGTGTCTTCTT
TACACCTGGGACTGGTAAGTCCACTACCCTTTTACAGTGTCTCACACTAA
CCCTACAGGCAAATGTCGCTCCTTCTATCACGACCATTCATCATCAACAG
CAGCTGCTGTTCCCTCGAGCTACCCAACCTACGACTCGAGACACCAAACA
CAGAAGCAAATACCCCCTCCCCAGTAACATCCATATCCCTCCAATGCCAA
CTAGGACAAAGAATCTCCACAATCCCCGGAGTAATGAGCGGCATCCTATT
ACCCAACCAAGCAATCGCCATCCAACAAGAAGTCACCCGATGGACTGAAA
CCTTCCCACCAATCTTCCACCTCACGGCCCCCGACACCACCTACGACCAC
ACCCACACCTACATACCAATGCAACGCCACCAACTCCACGCCCTAGCCCA
CATGGTCACCTTCATGCCCCTCAAACCCTGTCTCACCATCAACCCCACCA
CCCATACACCCAACCTCGAAAAATCCCTTCAACCCACTGCAGTATCCTGC
GCCTTGAACCTAATGCTCTCAGCCCAGCAACTCCTCTCGCATCTTCTCCC
CGCAAATGGCAAATTCCACTTTGCGCCGTTTCTGATGTTCGACACGGCTG
CGTACCTCTGCTCTGCTCTTATCCATGACAAACATCGAGACCTTCCCCAG
CGGGATAAGGTACTCGAGTGCATATCTCTAGCCCTAAGTACATTGAAAGA
TGTCGCCAGAACGGCCAAAACAGGCGCTACTTGCTATGCTGTCCTTGCGA
AGATTGTGGGTAATATACCTCTC
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:887653..889125-

>ASPNIDRAFT_176194-T1 ID=ASPNIDRAFT_176194-T1|Name=ASPNIDRAFT_176194-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5136bp|location=Sequence derived from alignment at ACJE01000021.1:887653..889125- (Aspergillus niger ATCC 1015)
CAGCTGCTGTTCCCTCGAGCTACCCAACCTACGACTCGAGACACCAAACA
CAGAAGCAAATACCCCCTCCCCAGTAACATCCATATCCCTCCAATGCCAA
CTAGGACAAAGAATCTCCACAATCCCCGGAGTAATGAGCGGCATCCTATT
ACCCAACCAAGCAATCGCCATCCAACAAGAAGTCACCCGATGGACTGAAA
CCTTCCCACCAATCTTCCACCTCACGGCCCCCGACACCACCTACGACCAC
ACCCACACCTACATACCAATGCAACGCCACCAACTCCACGCCCTAGCCCA
CATGGTCACCTTCATGCCCCTCAAACCCTGTCTCACCATCAACCCCACCA
CCCATACACCCAACCTCGAAAAATCCCTTCAACCCACTGCAGTATCCTGC
GCCTTGAACCTAATGCTCTCAGCCCAGCAACTCCTCTCGCATCTTCTCCC
CGCAAATGGCAAATTCCACTTTGCGCCGTTTCTGATGTTCGACACGGCTG
CGTACCTCTGCTCTGCTCTTATCCATGACAAACATCGAGACCTTCCCCAG
CGGGATAAGGTACTCGAGTGCATATCTCTAGCCCTAAGTACATTGAAAGA
TGTCGCCAGAACGGCCAAAACAGGCGCTACTTGCTATGCTGTCCTTGCGA
AGATTGTGGGTAATATACCTCTCGAATGCATCGTAGCTCCTCCAAAGCAA
AGGTGTCTGAATTCGAACGGGAGATGCGAAGACGGATATGGTGTCTTCTT
TACACCTGGGACTGATACCCTGGTGCAGTACTTTCTGAGTGAGATGAATG
ACCAGTACTATTGCCTTTACCCACCGACTTTTTCGCACGACTATGCGACG
TGGTGGTCAGGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTACAGC
CCTGCTGCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTCGAGA
CGCGACAGCAACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCTTTCC
GAGCAGTACCATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGACCAGG
AAAAGGCGGATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATATGGT
ACAAGACCGAAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGCTGCA
ATTCACGAAGCCCAAGAACTAGATGCTAAAGTACTTTTGTATACAGCAAT
CAGCTGCATTATCACCCTCCCAAGGACTCGTATCGCCCGAATTGGAAAAA
GCAATTCGCACTATTCCCCCAAAACCTTATACAGCAGCTGCTGTTCCCTC
GAGCTACCCAACCTACGACTCGAGACACCAAACACAGAAGCAAATACCCC
CTCCCCAGTAACATCCATATCCCTCCAATGCCAACTAGGACAAAGAATCT
CCACAATCCCCGGAGTAATGAGCGGCATCCTATTACCCAACCAAGCAATC
GCCATCCAACAAGAAGTCACCCGATGGACTGAAACCTTCCCACCAATCTT
CCACCTCACGGCCCCCGACACCACCTACGACCACACCCACACCTACATAC
CAATGCAACGCCACCAACTCCACGCCCTAGCCCACATGGTCACCTTCATG
CCCCTCAAACCCTGTCTCACCATCAACCCCACCACCCATACACCCAACCT
CGAAAAATCCCTTCAACCCACTGCAGTATCCTGCGCCTTGAACCTAATGC
TCTCAGCCCAGCAACTCCTCTCGCATCTTCTCCCCGCAAATGGCAAATTC
CACTTTGCGCCGTTTCTGATGTTCGACACGGCTGCGTACCTCTGCTCTGC
TCTTATCCATGACAAACATCGAGACCTTCCCCAGCGGGATAAGGTACTCG
AGTGCATATCTCTAGCCCTAAGTACATTGAAAGATGTCGCCAGAACGGCC
AAAACAGGCGCTACTTGCTATGCTGTCCTTGCGAAGATTGTGGGTAATAT
ACCTCTCGAATGCATCGTAGCTCCTCCAAAGCAAAGGTGTCTGAATTCGA
ACGGGAGATGCGAAGACGGATATGGTGTCTTCTTTACACCTGGGACTGAT
ACCCTGGTGCAGTACTTTCTGAGTGAGATGAATGACCAGTACTATTGCCT
TTACCCACCGACTTTTTCGCACGACTATGCGACGTGGTGGTCAGGGAAAG
CCAATGGCCAGTCATTGACACCCGCCTTTACAGCCCTGCTGCTGCATGTT
TGCGCCTGCGCTGTTCTCTACCTGGATGTCGAGACGCGACAGCAACTGGA
GAGTGATTTGGGCGAAAATTATGCCAGTCTTTCCGAGCAGTACCATCGTA
CTGCCAAGCAGCTCAGCAACGCCATTGGACCAGGAAAAGGCGGATTGACA
CAAGTACAGCAACTCTTCCTTGGTGCAATATGGTACAAGACCGAAGCATT
ATTTGTCGAGTCATGGCACGCCTTGGGGGCTGCAATTCACGAAGCCCAAG
AACTAGATGCTAAAGTACTTTTGTATACAGCAATCAGCTGCATTATCACC
CTCCCAAGGACTCGTATCGCCCGAATTGGAAAAAGCAATTCGCACTATTC
CCCCAAAACCTTATACAGCAGCTGCTGTTCCCTCGAGCTACCCAACCTAC
GACTCGAGACACCAAACACAGAAGCAAATACCCCCTCCCCAGTAACATCC
ATATCCCTCCAATGCCAACTAGGACAAAGAATCTCCACAATCCCCGGAGT
AATGAGCGGCATCCTATTACCCAACCAAGCAATCGCCATCCAACAAGAAG
TCACCCGATGGACTGAAACCTTCCCACCAATCTTCCACCTCACGGCCCCC
GACACCACCTACGACCACACCCACACCTACATACCAATGCAACGCCACCA
ACTCCACGCCCTAGCCCACATGGTCACCTTCATGCCCCTCAAACCCTGTC
TCACCATCAACCCCACCACCCATACACCCAACCTCGAAAAATCCCTTCAA
CCCACTGCAGTATCCTGCGCCTTGAACCTAATGCTCTCAGCCCAGCAACT
CCTCTCGCATCTTCTCCCCGCAAATGGCAAATTCCACTTTGCGCCGTTTC
TGATGTTCGACACGGCTGCGTACCTCTGCTCTGCTCTTATCCATGACAAA
CATCGAGACCTTCCCCAGCGGGATAAGGTACTCGAGTGCATATCTCTAGC
CCTAAGTACATTGAAAGATGTCGCCAGAACGGCCAAAACAGGCGCTACTT
GCTATGCTGTCCTTGCGAAGATTGTGGGTAATATACCTCTCGAATGCATC
GTAGCTCCTCCAAAGCAAAGGTGTCTGAATTCGAACGGGAGATGCGAAGA
CGGATATGGTGTCTTCTTTACACCTGGGACTGATACCCTGGTGCAGTACT
TTCTGAGTGAGATGAATGACCAGTACTATTGCCTTTACCCACCGACTTTT
TCGCACGACTATGCGACGTGGTGGTCAGGGAAAGCCAATGGCCAGTCATT
GACACCCGCCTTTACAGCCCTGCTGCTGCATGTTTGCGCCTGCGCTGTTC
TCTACCTGGATGTCGAGACGCGACAGCAACTGGAGAGTGATTTGGGCGAA
AATTATGCCAGTCTTTCCGAGCAGTACCATCGTACTGCCAAGCAGCTCAG
CAACGCCATTGGACCAGGAAAAGGCGGATTGACACAAGTACAGCAACTCT
TCCTTGGTGCAATATGGTACAAGACCGAAGCATTATTTGTCGAGTCATGG
CACGCCTTGGGGGCTGCAATTCACGAAGCCCAAGAACTAGATGCTAAAGT
ACTTTTGTATACAGCAATCAGCTGCATTATCACCCTCCCAAGGACTCGTA
TCGCCCGAATTGGAAAAAGCAATTCGCACTATTCCCCCAAAACCTTATAC
AGCAGCTGCTGTTCCCTCGAGCTACCCAACCTACGACTCGAGACACCAAA
CACAGAAGCAAATACCCCCTCCCCAGTAACATCCATATCCCTCCAATGCC
AACTAGGACAAAGAATCTCCACAATCCCCGGAGTAATGAGCGGCATCCTA
TTACCCAACCAAGCAATCGCCATCCAACAAGAAGTCACCCGATGGACTGA
AACCTTCCCACCAATCTTCCACCTCACGGCCCCCGACACCACCTACGACC
ACACCCACACCTACATACCAATGCAACGCCACCAACTCCACGCCCTAGCC
CACATGGTCACCTTCATGCCCCTCAAACCCTGTCTCACCATCAACCCCAC
CACCCATACACCCAACCTCGAAAAATCCCTTCAACCCACTGCAGTATCCT
GCGCCTTGAACCTAATGCTCTCAGCCCAGCAACTCCTCTCGCATCTTCTC
CCCGCAAATGGCAAATTCCACTTTGCGCCGTTTCTGATGTTCGACACGGC
TGCGTACCTCTGCTCTGCTCTTATCCATGACAAACATCGAGACCTTCCCC
AGCGGGATAAGGTACTCGAGTGCATATCTCTAGCCCTAAGTACATTGAAA
GATGTCGCCAGAACGGCCAAAACAGGCGCTACTTGCTATGCTGTCCTTGC
GAAGATTGTGGGTAATATACCTCTCGAATGCATCGTAGCTCCTCCAAAGC
AAAGGTGTCTGAATTCGAACGGGAGATGCGAAGACGGATATGGTGTCTTC
TTTACACCTGGGACTGATACCCTGGTGCAGTACTTTCTGAGTGAGATGAA
TGACCAGTACTATTGCCTTTACCCACCGACTTTTTCGCACGACTATGCGA
CGTGGTGGTCAGGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTACA
GCCCTGCTGCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTCGA
GACGCGACAGCAACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCTTT
CCGAGCAGTACCATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGACCA
GGAAAAGGCGGATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATATG
GTACAAGACCGAAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGCTG
CAATTCACGAAGCCCAAGAACTAGATGCTAAAGTACTTTTGTATACAGCA
ATCAGCTGCATTATCACCCTCCCAAGGACTCGTATCGCCCGAATTGGAAA
AAGCAATTCGCACTATTCCCCCAAAACCTTATACAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176194ASPNIDRAFT_176194Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176194-T1ASPNIDRAFT_176194-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176194-T1.cdsASPNIDRAFT_176194-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176194-T1.exon4ASPNIDRAFT_176194-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176194-T1.exon3ASPNIDRAFT_176194-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176194-T1.exon2ASPNIDRAFT_176194-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176194-T1.exon1ASPNIDRAFT_176194-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000211.3
NoteantiSMASH:Cluster_10000211.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:887653..889125 -
Powered by Drupal