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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:2106471..2107663+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_176840-T1 ID=ASPNIDRAFT_176840-T1|Name=ASPNIDRAFT_176840-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1193bp|location=Sequence derived from alignment at ACJE01000021.1:2106471..2107663+ (Aspergillus niger ATCC 1015)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTACGTATTGATATGCATGTGTGGCCCTTCATT
TGCGATCGTCTTGCGTGGCATGTCTGTCAATAATGTGGGGAGATCATGCG
CAAATTCAGCGTAGAAAGAAAAACTGCCTGCGAAACTTCCAGTCGGCCCC
GCAACCCCGCTAACCGTTTCACCAACAGGTAAAAAGCGCTTCGAACTCGC
CTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATC
TCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCG
CAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCC
TGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTG
GCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTG
GATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATAC
CCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTC
AACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGC
GAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAA
GTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGC
AACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCT
GTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGC
CGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGA
ACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAG
GATGAGGCAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAG
CAATGTCAAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGG
AGGTTGTCGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGA
GCTTTCAAGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGG
ACGTGTGGAGGTGCTGGATATGACGGTGACCCATGAAGAGTAA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:2106471..2107663+ >ASPNIDRAFT_176840-T1 ID=ASPNIDRAFT_176840-T1|Name=ASPNIDRAFT_176840-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2727bp|location=Sequence derived from alignment at ACJE01000021.1:2106471..2107663+ (Aspergillus niger ATCC 1015)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCGAACTCGCCTGCTACAAGA
ACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTCGACAATGTC
CTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCAAACAGCCCC
ATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTGCAGATGAGA
TCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAG
CGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGATATCGTATC
AGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCCCCGGAATGA
TTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAACAGCAGTCG
CAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGAGGAGAGCCG
CCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGTCGGCGAAGA
GTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAACCTATCCCT
GTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGTGTCACTGTT
GAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTA
AAGAAAAGGAGGCGCCCAATGTCAAGGATAAGATCCTGAGCTATATCGAA
TCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGAGATCATTGG
CTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTGTGGGCAACG
AGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACGGTGACCCAT
GAAGAGTAAATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAA
CGTATCAGTCGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCGAACTCGCCT
GCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTC
GACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCA
AACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTG
CAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGC
GAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGA
TATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCC
CCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAA
CAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGA
GGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGT
CGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAA
CCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGT
GTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCG
CGGGTGGTAAAGAAAAGGAGGCGCCCAATGTCAAGGATAAGATCCTGAGC
TATATCGAATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGA
GATCATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTG
TGGGCAACGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACG
GTGACCCATGAAGAGTAAATGCCCATCAACCAACCATCAAATCAGATTAA
ATTTACCAACGTATCAGTCGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCG
AACTCGCCTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAG
AAGGATCTCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTC
CAAAGCGCAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCG
ACACGCCTGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTG
CAAGTTGGCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGA
GGTGTTGGATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAG
TCTATACCCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCT
AGTGGTCAACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGA
CGACAGCGAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGG
CCAACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATT
GCATGGCAACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCAC
CTGTCCTGTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTG
GTGCTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCCAATGTCAAGGATAAG
ATCCTGAGCTATATCGAATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGA
CGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGA
ATGAATTTGTGGGCAACGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTG
GATATGACGGTGACCCATGAAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042254 | ribosome biogenesis |
| GO:0042256 | mature ribosome assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926400M |
| DBxref | InterPro:IPR019783 |
| DBxref | InterPro:IPR037188 |
| DBxref | InterPro:IPR036786 |
| DBxref | InterPro:IPR018978 |
| DBxref | InterPro:IPR002140 |
| DBxref | PFAM:PF09377 |
| DBxref | PFAM:PF01172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:2106471..2107663 + |
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