You are here

Home

ASPNIDRAFT_177545-T1, ASPNIDRAFT_177545-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_177545-T1
Unique NameASPNIDRAFT_177545-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1159646..1160703+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_177545-T1 ID=ASPNIDRAFT_177545-T1|Name=ASPNIDRAFT_177545-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1058bp|location=Sequence derived from alignment at ACJE01000021.1:1159646..1160703+ (Aspergillus niger ATCC 1015)
ATGACTGACTGGCACGGACGGACTCCTTTGCATCATGCAGTCCTAAGTGG
GAAAGAAGAGGTCGTGAAGCTACTCCTGGACTATGGTGTAGACCTGAATC
TCAAAGACAGAAATGGTGACACTGCTTTGATATGCGCAGTCACTGTAAGA
CGTGACCCGATAGTTCGCCTCCTCTTGAGCTACAAACCTCAGCTTGATTC
TCAGGACAGCTATGGTAACACGGCTTTGATCGAGGCAGTTGCCTTTTGTT
CCGATGAGACGTTCGGTGAACTGTTACAAAGTGGCCCCGATCTGAATATT
CAGAATAGAAATGGTGTGACCGCCTTGATTCGTGCAGCCCTTGACAGACA
AGTAGAAAAGGCCCGTCTCTTGTTGGCATCTGGGCCGCAGGTTAATATTG
GCGACGTTACAGGCGCCACGGCTTTGATTTATGCAGCCCAAAATGGGTGC
TACGAGATTGTTGAAGCACTAGTCCAGGGTGGAGCCCATCTGGACATTCA
GGACAATAGAGATCAGACGGCTCTTCTGTGGGCTATGCGAAGAGATCACG
AGCCGATAACTACTTTACTTATCCTAAGTGGTGTAGATATAGAGATAACC
GCAGATAAACAGGGGGTTTTCCGCTGATTTTAGCCGTTGAGGAATCTTGG
AGTCATGTCATTCGTCAACTGGTACTAATGAAAGGCGCGGATGTGAACCG
CCAGGATTCAGATGGGAGAACAGCCCTAATCTATTCTTCTCAGCATACCA
CAAGCATCCCCTGCGTTCGTTCGCTTCTGGAATGTGGCGCTAAGCTCAAC
AGTCAAGACAACAGAGGATCTACTGCATTAATCTATGCAGCTCTTTGGGG
TCAGGAGGAGAAGGTCAATTTGCTGCTAGAAAGCGGCGCTGATTGGAATG
TGCGCGATGACGAGGGACAGACGGCTTTGTTTTATGCACGTCACAGTAAA
CATGACAATATAATACAGTCGTTACTGCGTTATCAAACAGCTGATGAGGC
ATCCCAGTCTGACAATGCCACAGTCTGCGAGGACCACGTGTTATCTGGAA
GCGAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1159646..1160703+

>ASPNIDRAFT_177545-T1 ID=ASPNIDRAFT_177545-T1|Name=ASPNIDRAFT_177545-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1692bp|location=Sequence derived from alignment at ACJE01000021.1:1159646..1160703+ (Aspergillus niger ATCC 1015)
ATGACTGACTGGCACGGACGGACTCCTTTGCATCATGCAGTCCTAAGTGG
GAAAGAAGAGGTCGTGAAGCTACTCCTGGACTATGGTGTAGACCTGAATC
TCAAAGACAGAAATGGTGACACTGCTTTGATATGCGCAGTCACTGTAAGA
CGTGACCCGATAGTTCGCCTCCTCTTGAGCTACAAACCTCAGCTTGATTC
TCAGGACAGCTATGGTAACACGGCTTTGATCGAGGCAGTTGCCTTTTGTT
CCGATGAGACGTTCGGTGAACTGTTACAAAGTGGCCCCGATCTGAATATT
CAGAATAGAAATGGTGTGACCGCCTTGATTCGTGCAGCCCTTGACAGACA
AGTAGAAAAGGCCCGTCTCTTGTTGGCATCTGGGCCGCAGGTTAATATTG
GCGACGTTACAGGCGCCACGGCTTTGATTTATGCAGCCCAAAATGGGTGC
TACGAGATTGTTGAAGCACTAGTCCAGGGTGGAGCCCATCTGGACATTCA
GGACAATAGAGATCAGACGGCTCTTCTGTGGGCTATGCGAAGAGATCACG
AGCCGATAACTACTTTACTTATCCTAAGTGGTCTCAACAGTCAAGACAAC
AGAGGATCTACTGCATTAATCTATGCAGCTCTTTGGGGTCAGGAGGAGAA
GGTCAATTTGCTGCTAGAAAGCGGCGCTGATTGGAATGTGCGCGATGACG
AGGGACAGACGGCTTTGTTTTATGCACGTCACAGTAAACATGACAATATA
ATACAGTCGTTACTGCGTTATCAAACAGCTGATGAGGCATCCCAGTCTGA
CAATGCCACAGTCTGCGAGGACCACGTGTTATCTGGAAGCGAATAAATGA
CTGACTGGCACGGACGGACTCCTTTGCATCATGCAGTCCTAAGTGGGAAA
GAAGAGGTCGTGAAGCTACTCCTGGACTATGGTGTAGACCTGAATCTCAA
AGACAGAAATGGTGACACTGCTTTGATATGCGCAGTCACTGTAAGACGTG
ACCCGATAGTTCGCCTCCTCTTGAGCTACAAACCTCAGCTTGATTCTCAG
GACAGCTATGGTAACACGGCTTTGATCGAGGCAGTTGCCTTTTGTTCCGA
TGAGACGTTCGGTGAACTGTTACAAAGTGGCCCCGATCTGAATATTCAGA
ATAGAAATGGTGTGACCGCCTTGATTCGTGCAGCCCTTGACAGACAAGTA
GAAAAGGCCCGTCTCTTGTTGGCATCTGGGCCGCAGGTTAATATTGGCGA
CGTTACAGGCGCCACGGCTTTGATTTATGCAGCCCAAAATGGGTGCTACG
AGATTGTTGAAGCACTAGTCCAGGGTGGAGCCCATCTGGACATTCAGGAC
AATAGAGATCAGACGGCTCTTCTGTGGGCTATGCGAAGAGATCACGAGCC
GATAACTACTTTACTTATCCTAAGTGGTCTCAACAGTCAAGACAACAGAG
GATCTACTGCATTAATCTATGCAGCTCTTTGGGGTCAGGAGGAGAAGGTC
AATTTGCTGCTAGAAAGCGGCGCTGATTGGAATGTGCGCGATGACGAGGG
ACAGACGGCTTTGTTTTATGCACGTCACAGTAAACATGACAATATAATAC
AGTCGTTACTGCGTTATCAAACAGCTGATGAGGCATCCCAGTCTGACAAT
GCCACAGTCTGCGAGGACCACGTGTTATCTGGAAGCGAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177545ASPNIDRAFT_177545Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177545-T1.exon1ASPNIDRAFT_177545-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_177545-T1.exon2ASPNIDRAFT_177545-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177545-T1.cdsASPNIDRAFT_177545-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177545-T1ASPNIDRAFT_177545-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000211.4
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1159646..1160703 +
Powered by Drupal