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ASPNIDRAFT_177858-T1, ASPNIDRAFT_177858-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_177858-T1
Unique NameASPNIDRAFT_177858-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3126384..3127272-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_177858-T1 ID=ASPNIDRAFT_177858-T1|Name=ASPNIDRAFT_177858-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=889bp|location=Sequence derived from alignment at ACJE01000021.1:3126384..3127272- (Aspergillus niger ATCC 1015)
ATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCAT
TACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCC
TGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACA
GGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACA
GGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGC
TTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGGTTTG
TCCACGAACACCTCCGCCTCCCTGGCTTGGACGCTTGCTGACGAGGACCA
GTCAACAACGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCC
TGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACC
TCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAAC
ATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAG
CGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGG
TAAGCTGGGCTCTAATGTGGGAACCCGCACGGGACGTGTGCTAATTGGTG
TCTAGCTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCC
GGTCCGGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAA
CAAGACAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGC
AGGATATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGG
ATCTCCGGACAGGTCATTTCCGTCAGTGGTGGAATTGTG
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Coding sequence (CDS) from alignment at ACJE01000021.1:3126384..3127272-

>ASPNIDRAFT_177858-T1 ID=ASPNIDRAFT_177858-T1|Name=ASPNIDRAFT_177858-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2331bp|location=Sequence derived from alignment at ACJE01000021.1:3126384..3127272- (Aspergillus niger ATCC 1015)
CTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCCGGTCC
GGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGA
CAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGAT
ATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTC
CGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGTCAACAACGCGGCCAC
TGGCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCGACCA
CCTTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGCAGTG
AAGCACATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGGCGTC
CAAGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCGGCGA
TGGATGCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAATCTGATTCC
TTTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTAAAAC
GAGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGTGCAG
CGGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGCCACC
GTGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTACAGGC
GGACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCAGTCA
ATGCCTTTGGAAGGCTTGATATCCTAGCTTGGTCGCAATCATGGCGGCAT
AACCATCAACACAGTTTCCCCCGGTCCGGTAGATACAGATGGTCTACCGC
CTCAGGTGGCGGAAAAGATCAACAAGACAATGGTTCCCATGAGCCGAGTC
GAGGAGCGATTGGGAACCGTGCAGGATATCGCGGACGCAGTGCTGTTGTT
GTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTTCCGTCAGTG
GTGGAATTGTGTCAACAACGCGGCCACTGGCACTCCAGGACCGGTACTCA
GCGCTGCGCCTGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTTTGGT
CCAATCTACCTCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCAGTCG
AGTCATCAACATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGATCCC
CAGTCTATAGCGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTCCATG
GCAATGGAGATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCAAAGT
AGCCCTCATTACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCAATTG
CCACTCTCCTGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGTCTCA
CCGTCCACAGGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCGCGGC
GGGCGGACAGGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGACGAAG
CACAGAAGCTTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGATATC
CTAGCTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCCG
GTCCGGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAAC
AAGACAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGCA
GGATATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGA
TCTCCGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGTCAACAACGCGG
CCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCG
ACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGC
AGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGG
CGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCG
GCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAATCTGA
TTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTA
AAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGT
GCAGCGGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGC
CACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTAC
AGGCGGACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCA
GTCAATGCCTTTGGAAGGCTTGATATCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177858ASPNIDRAFT_177858Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177858-T1ASPNIDRAFT_177858-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177858-T1.cdsASPNIDRAFT_177858-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177858-T1.exon3ASPNIDRAFT_177858-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_177858-T1.exon2ASPNIDRAFT_177858-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_177858-T1.exon1ASPNIDRAFT_177858-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3126384..3127272 -
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