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ASPNIDRAFT_179747-T1, ASPNIDRAFT_179747-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_179747-T1
Unique NameASPNIDRAFT_179747-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1736845..1737953-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_179747-T1 ID=ASPNIDRAFT_179747-T1|Name=ASPNIDRAFT_179747-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1109bp|location=Sequence derived from alignment at ACJE01000019.1:1736845..1737953- (Aspergillus niger ATCC 1015)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTTCGTATTCTTACCGTCCTT
CTTGAGTTTGTCGAGATTAACGTGTGATTTCGGCGCAGGTCGCAGATCTC
CCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCAT
CCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGTG
CTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTT
TGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGTT
CAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATG
CCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTG
CCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGAT
TGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTG
ATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCCAAATTCGTCAAG
AAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCG
TGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTA
TTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGC
AAGGACTAA
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Coding sequence (CDS) from alignment at ACJE01000019.1:1736845..1737953-

>ASPNIDRAFT_179747-T1 ID=ASPNIDRAFT_179747-T1|Name=ASPNIDRAFT_179747-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2100bp|location=Sequence derived from alignment at ACJE01000019.1:1736845..1737953- (Aspergillus niger ATCC 1015)
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179747ASPNIDRAFT_179747Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179747-T1ASPNIDRAFT_179747-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179747-T1.cdsASPNIDRAFT_179747-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179747-T1.exon2ASPNIDRAFT_179747-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_179747-T1.exon1ASPNIDRAFT_179747-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09263FTE
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR040442
DBxrefInterPro:IPR003700
DBxrefPFAM:PF02548
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1736845..1737953 -
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