You are here

Home

ASPNIDRAFT_180070-T1, ASPNIDRAFT_180070-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_180070-T1
Unique NameASPNIDRAFT_180070-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:897042..897989+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_180070-T1 ID=ASPNIDRAFT_180070-T1|Name=ASPNIDRAFT_180070-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=948bp|location=Sequence derived from alignment at ACJE01000009.1:897042..897989+ (Aspergillus niger ATCC 1015)
ATGACGCAAACTTGGACCTTTCCGGGAGTTGCCGTCGTCACAGGAGCCGG
TGGCACAGGCACGTATACCTTCAAGTCCATCGCGGGGAAAGGAAAAAGCA
AAAATTTTAACCGTCTCGCAGGCATCGGTGCAGCCACAGCAAAAGCATTT
GCTTCGGCAGGATGTGAAAGAATCGCAATCACGGATCTTAATTCTGCCTC
TCTAGATCAGACTCGGGAGGCCATCCTCGCCTCTTACCCTCAGACGCGTC
TTCTAGTCAAGGCGGGTGATATATCCGATGAGAGCTTTGTCGAGTCATTC
GTCAGTGAGGTGGTGGATACATTTGGACGGCTGGATTATGCGGTCAATTG
CGCCGGAATCCTAGGAGACGCCATGCGGACAACCGAGACATCAACGGCGG
TATTTGACCATATCAACAACATCAATTACCGGGGTGCTTGGTTCTGCTCT
AGAGCAGAGTTGAGACAAATGGTAGCACAGGATTCTTTACCGAGTCATGA
TCCGAATCGCGTTCCTCAGCGAGGGGCTATTGTGAACGTTGCAAGCCAGC
TGGGAATCGTAGGGCGCCCGAGTGCTCGTAAGTTCACATTTTCTCCATCC
CGAATTTTCCAGGTCACTTGGATTGAGCTAACTGCGTCGGATTTGCTTCT
AGCTGCGTATTGTAGCTCCAAGGCTGCTGTGATTGCGATGACTCGCTCTG
ATGCAATCGACTACTCTGCGGAGGGCATCCGTGTAAATTGTGTCTGTCCG
GGTGTAATTGAGACTCCAATGACAACGTACAGTGAGGAAATTCGCGAGCA
CTTTCAACCAGCAGTCGAGATTGCCCCAATGAAGAGGATGGGGAAACCGG
AAGAAGTGGCTGATTCCATACTCTTCTTGTGTTCGACTTTTGCCTCGTTT
GTGCAAGGACATGCGCTTGTTGTCGATGGAGGGTATATAATCAACTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:897042..897989+

>ASPNIDRAFT_180070-T1 ID=ASPNIDRAFT_180070-T1|Name=ASPNIDRAFT_180070-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1746bp|location=Sequence derived from alignment at ACJE01000009.1:897042..897989+ (Aspergillus niger ATCC 1015)
ATGACGCAAACTTGGACCTTTCCGGGAGTTGCCGTCGTCACAGGAGCCGG
TGGCACAGGCACGTATACCTTCAAGTCCATCGCGGGGAAAGGAAAAAGCA
AAAATTTTAACCGTCTCGCAGGCATCGGTGCAGCCACAGCAAAAGCATTT
GCTTCGGCAGGATGTGAAAGAATCGCAATCACGGATCTTAATTCTGCCTC
TCTAGATCAGACTCGGGAGGCCATCCTCGCCTCTTACCCTCAGACGCGTC
TTCTAGTCAAGGCGGGTGATATATCCGATGAGAGCTTTGTCGAGTCATTC
GTCAGTGAGGTGGTGGATACATTTGGACGGCTGGATTATGCGGTCAATTG
CGCCGGAATCCTAGGAGACGCCATGCGGACAACCGAGACATCAACGGCGG
TATTTGACCATATCAACAACATCAATTACCGGGGTGCTTGGTTCTGCTCT
AGAGCAGAGTTGAGACAAATGGTAGCACAGGATTCTTTACCGAGTCATGA
TCCGAATCGCGTTCCTCAGCGAGGGGCTATTGTGAACGTTGCAAGCCAGC
TGGGAATCGTAGGGCGCCCGAGTGCTCCTGCGTATTGTAGCTCCAAGGCT
GCTGTGATTGCGATGACTCGCTCTGATGCAATCGACTACTCTGCGGAGGG
CATCCGTGTAAATTGTGTCTGTCCGGGTGTAATTGAGACTCCAATGACAA
CGTACAGTGAGGAAATTCGCGAGCACTTTCAACCAGCAGTCGAGATTGCC
CCAATGAAGAGGATGGGGAAACCGGAAGAAGTGGCTGATTCCATACTCTT
CTTGTGTTCGACTTTTGCCTCGTTTGTGCAAGGACATGCGCTTGTTGTCG
ATGGAGGGTATATAATCAACTGAATGACGCAAACTTGGACCTTTCCGGGA
GTTGCCGTCGTCACAGGAGCCGGTGGCACAGGCACGTATACCTTCAAGTC
CATCGCGGGGAAAGGAAAAAGCAAAAATTTTAACCGTCTCGCAGGCATCG
GTGCAGCCACAGCAAAAGCATTTGCTTCGGCAGGATGTGAAAGAATCGCA
ATCACGGATCTTAATTCTGCCTCTCTAGATCAGACTCGGGAGGCCATCCT
CGCCTCTTACCCTCAGACGCGTCTTCTAGTCAAGGCGGGTGATATATCCG
ATGAGAGCTTTGTCGAGTCATTCGTCAGTGAGGTGGTGGATACATTTGGA
CGGCTGGATTATGCGGTCAATTGCGCCGGAATCCTAGGAGACGCCATGCG
GACAACCGAGACATCAACGGCGGTATTTGACCATATCAACAACATCAATT
ACCGGGGTGCTTGGTTCTGCTCTAGAGCAGAGTTGAGACAAATGGTAGCA
CAGGATTCTTTACCGAGTCATGATCCGAATCGCGTTCCTCAGCGAGGGGC
TATTGTGAACGTTGCAAGCCAGCTGGGAATCGTAGGGCGCCCGAGTGCTC
CTGCGTATTGTAGCTCCAAGGCTGCTGTGATTGCGATGACTCGCTCTGAT
GCAATCGACTACTCTGCGGAGGGCATCCGTGTAAATTGTGTCTGTCCGGG
TGTAATTGAGACTCCAATGACAACGTACAGTGAGGAAATTCGCGAGCACT
TTCAACCAGCAGTCGAGATTGCCCCAATGAAGAGGATGGGGAAACCGGAA
GAAGTGGCTGATTCCATACTCTTCTTGTGTTCGACTTTTGCCTCGTTTGT
GCAAGGACATGCGCTTGTTGTCGATGGAGGGTATATAATCAACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180070ASPNIDRAFT_180070Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180070-T1.exon1ASPNIDRAFT_180070-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_180070-T1.exon2ASPNIDRAFT_180070-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180070-T1.cdsASPNIDRAFT_180070-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180070-T1ASPNIDRAFT_180070-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:897042..897989 +
Powered by Drupal