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ASPNIDRAFT_181451-T1, ASPNIDRAFT_181451-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_181451-T1
Unique NameASPNIDRAFT_181451-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:960712..962502-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_181451-T1 ID=ASPNIDRAFT_181451-T1|Name=ASPNIDRAFT_181451-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1791bp|location=Sequence derived from alignment at ACJE01000009.1:960712..962502- (Aspergillus niger ATCC 1015)
ATGCGTGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGC
CCTTCCCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTT
TCCTCGCATTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCA
TCCGCCATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTT
CAAGGAGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTC
TACATAGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCAC
ATCGCAAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGA
TCCAGGCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCT
ACTCTGACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTT
GAAGGCGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGG
CACATACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTG
CTCAAGAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCA
AACCTTCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCG
CATTTTCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATAT
CCGTCGTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATG
AGCGATGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGG
ACCTCCTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACC
TTGGTGGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTT
GCTGTGGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAA
CCTCAACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACG
CCATCAGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGC
ACCAACCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGT
CGATGGCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTG
TCACTGGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAAC
AATGGTATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGA
GCTCTGCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTG
GCTTCATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGC
GCGAAGCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGT
CGTATTTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGGTAAGTCC
TCGGTCAGACATTATTCTTCTTCCTATCCTGTACTCACTACGTTTGCAGC
GGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGAT
CGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGC
GGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCG
GTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCA
GACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGG
TAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATG
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Coding sequence (CDS) from alignment at ACJE01000009.1:960712..962502-

>ASPNIDRAFT_181451-T1 ID=ASPNIDRAFT_181451-T1|Name=ASPNIDRAFT_181451-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3468bp|location=Sequence derived from alignment at ACJE01000009.1:960712..962502- (Aspergillus niger ATCC 1015)
CGGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGA
TCGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGG
CGGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGC
GGTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGC
AGACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGG
GTAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGATGCGTGC
TCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTCCCT
CCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTCGCA
TTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCATCCGCCAT
ATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGGAGA
ACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACATAGC
ACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGCAAG
AGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAGGCA
CCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCTGAC
GACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGGCGT
CACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACATACT
ACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAAGAA
AACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCTTCC
CCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTTTCT
TCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTCGTC
ATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGATGA
GACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTCCTC
TTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGG
GGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGTGGA
CGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCAACT
ATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATCAGA
GAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAACCT
CCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATGGCA
GTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTGTCACTGGC
TTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGGTAT
CCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCTGCG
CGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTCATG
GTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCT
CGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTATTTG
GTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGCGGTCGCGCTTACTCT
CCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGATCGGTGTCATGGGCTC
GGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGCGGACAGCGGACCCCG
ATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCGGTCTTTTCCTCGGCA
CGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCAGACGAGACGGTTCCT
TGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGGTAGATGCTGATGTGC
AGACTCGATTTGGGGTGTTCCGGATGATGCGTGCTCCGTCTCCGCTCCTG
CGGAGCTTGCGATCCAAACAACCCGCCCTTCCCTCCCGCTGTCTACCAGT
GCGACAACGCTCAACGAGAACTCCTTTCCTCGCATTCTCGAGATCTGTTG
CCAGCTATACCCATCCTCACCATGCATCCGCCATATCGGCTCTTCCCACA
GCTGTGGACACCTCGTCCTCGGATTTCAAGGAGAACGCCCAGCAAATGCA
GGAGCTCCTCGACCGGATGGCTAGTCTACATAGCACAATTTCCCAAGGAG
GGCCGCAGAAAGCCAAGGACAAGCACATCGCAAGAGGGAAAATGCTCCCT
CGCGACAGAGTTACCGCCCTCATTGATCCAGGCACCTCGTTCCTAGAGCT
CTCTCCACTCGCCGGCCATGATGTCTACTCTGACGACGTCCCAGCAGGTG
GCATCATAACAGGCATTGGAACAGTTGAAGGCGTCACCTGTATGATCGTT
GCTAATGACAGCACGGTCAAGGGAGGCACATACTACCCCATCACCGTTAA
AAAGCACCTACGCGCACAAGCAATTGCTCAAGAAAACAAGCTTCCCTGCC
TCTACCTCGTGGACTCTGGTGGTGCAAACCTTCCCCACCAAGCAGATGTC
TTTCCAGACAAGGAGCATTTTGGTCGCATTTTCTTCAACCAAGCCCGCAT
GAGTTCCCTGGGCATTCCACAAATATCCGTCGTCATGGGCCCCTGCACCG
CTGGTGGGGCCTACGTCCCCGCTATGAGCGATGAGACGATCATTGTCGAG
AACCAAGGCACCATCTTTTTGGCCGGACCTCCTCTTGTCAAAGCTGCTAC
AGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGGGGTCAGCTTCATAGCA
CAATCTCAGGTGTAACAGACTATCTTGCTGTGGACGATGCGCATGCCATT
GTTCTCGCCCGGAGATCCATCTCCAACCTCAACTATCCAAAAACGACCGT
TCCTCTTAAGAACATCCCCGGTGACGCCATCAGAGAGCCGTTGTATGATC
CAACGGAGCTGAATGGCATCGTGGGCACCAACCTCCGGCGCCAGATTCCC
GTCCACGAGGTCATCGCCCGTATCGTCGATGGCAGTGAGTTTGCCGAATT
CAAGCGGGACTATGGCACGACACTTGTCACTGGCTTTGCTCGTATCTTCG
GGCATCAAGTCGGTATTGTCGCCAACAATGGTATCCTGTTCTCCGAGTCC
TCCCTGAAAGGAGCACACTTCATCGAGCTCTGCGCGCAACGTAAAATTCC
TCTAGTCTTCCTCCAGAATATTTCTGGCTTCATGGTTGGCGCAGATGCTG
AAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCTCGTTACGGCCGTGGCC
TGCGCAGACGTCCCTAAGTTCACAGTCGTATTTGGTTCCAGCGCTGGCGC
GGGCAACTATGGAATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181451ASPNIDRAFT_181451Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181451-T1ASPNIDRAFT_181451-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181451-T1.cdsASPNIDRAFT_181451-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181451-T1.exon2ASPNIDRAFT_181451-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_181451-T1.exon1ASPNIDRAFT_181451-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR011762
DBxrefInterPro:IPR011763
DBxrefInterPro:IPR034733
DBxrefPFAM:PF01039
Product subunit beta
Product3-methylcrotonyl-CoA carboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:960712..962502 -
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