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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1633359..1634408- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_181472-T1 ID=ASPNIDRAFT_181472-T1|Name=ASPNIDRAFT_181472-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1050bp|location=Sequence derived from alignment at ACJE01000009.1:1633359..1634408- (Aspergillus niger ATCC 1015)
ATGCTGAACCTCAATATCTTCCGGCTACTGGCCGATCTCTCCCATATCTC
CTCCAAATGTGTCTTGATATGGGCTATCCATCGCAATAAGAGCGCAGAAG
GTCCGTATAATAACTTGCATTGTTGCAGTGTGCTGCGAGCTAAGCATCGT
TTCAAATAATAGGAGTCTCCCTTCTGACGCAGATGCTCTATGCTTTGGTG
TTCGTGACTCGTTATCTCGACCTTTTCTCGAAGGCAGGATGGAAGCACTT
CTACCTCGTATTCTTCAAGCTATTTTATATCATCTCCTCGTTCTACGTTA
TATACCTGATGATGAGAGTATTTCCCCGGACACGGGAAAGGGAGCGAGCC
TGGAAGATGGCTATAATATCGGTCGCTCTATCTCTGGTTCTGGCTCCTAT
ATCTATTGTCATCTTCTATCGTGGTTATCCCGATAGATGGTTCACGGAGG
TAAGTGGGATGGCTCGCATTGGCCTGCAGACGTCGCTAACCAAACCGTGA
TGATATGCAGACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTG
TTCTCCCTCAATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATC
GATTCATACTACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCT
CAATTGGCTTGTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTG
CAGACCTCTACGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGG
GTTTACTACTCCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGA
CTCGGAAGATTTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCC
GGCAGCGAAGGAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTG
GAGGATGAGGAAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGG
AGCAAGGGGGATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTG
GGACAAGCCAAGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGAC
back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1633359..1634408- >ASPNIDRAFT_181472-T1 ID=ASPNIDRAFT_181472-T1|Name=ASPNIDRAFT_181472-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2781bp|location=Sequence derived from alignment at ACJE01000009.1:1633359..1634408- (Aspergillus niger ATCC 1015)
ACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTGTTCTCCCTCA
ATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATCGATTCATACT
ACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCTCAATTGGCTT
GTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTGCAGACCTCTA
CGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGGGTTTACTACT
CCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGACTCGGAAGAT
TTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCCGGCAGCGAAG
GAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTGGAGGATGAGG
AAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGGAGCAAGGGGG
ATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTGGGACAAGCCA
AGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGACGAGTCTCCCT
TCTGACGCAGATGCTCTATGCTTTGGTGTTCGTGACTCGTTATCTCGACC
TTTTCTCGAAGGCAGGATGGAAGCACTTCTACCTCGTATTCTTCAAGCTA
TTTTATATCATCTCCTCGTTCTACGTTATATACCTGATGATGAGAGTATT
TCCCCGGACACGGGAAAGGGAGCGAGCCTGGAAGATGGCTATAATATCGG
TCGCTCTATCTCTGGTTCTGGCTCCTATATCTATTGTCATCTTCTATCGT
GGTTATCCCGATAGATGGTTCACGGAGATGCTGAACCTCAATATCTTCCG
GCTACTGGCCGATCTCTCCCATATCTCCTCCAAATGTGTCTTGATATGGG
CTATCCATCGCAATAAGAGCGCAGAAGACTTGCTGGACTTTCTCGATTAT
ATTAGAGTCCGTCTGTGTTCTCCCTCAATTGTTGCTCTTGCGCCAAACGA
CCGTTCCGACAGTCATCGATTCATACTACCTGCTTATGCTGGGATCCTAC
CGTGCCTTCTATATTCTCAATTGGCTTGTGCGGGGACTGGGCTCTGAGGG
TCATTGGGACGTAATTGCAGACCTCTACGGTGTCATCCAGACGGCTTTCT
ACGTCGATTTCGCCTGGGTTTACTACTCCCGCCAACGCGTGAAGCTCCGA
AACGGCGGTGTCGTTGACTCGGAAGATTTCCGCCATAGCTGGCTAGTGAG
CAAGATACTGAATTTCCGGCAGCGAAGGAGTGCAGATGAGGAGCAGAATT
TGAACGACGAGGACGTGGAGGATGAGGAAGTTGCTGGTGGCGGTAGACCC
AGGAACAACCGCTGGGGAGCAAGGGGGATCTCCGTCTCGGCCGACGATAC
GCTAGGAAACCATCGTGGGACAAGCCAAGACGAGAGTCTGGAAGGGTTCT
TAGAAGATGAAGAAGACGAGTCTCCCTTCTGACGCAGATGCTCTATGCTT
TGGTGTTCGTGACTCGTTATCTCGACCTTTTCTCGAAGGCAGGATGGAAG
CACTTCTACCTCGTATTCTTCAAGCTATTTTATATCATCTCCTCGTTCTA
CGTTATATACCTGATGATGAGAGTATTTCCCCGGACACGGGAAAGGGAGC
GAGCCTGGAAGATGGCTATAATATCGGTCGCTCTATCTCTGGTTCTGGCT
CCTATATCTATTGTCATCTTCTATCGTGGTTATCCCGATAGATGGTTCAC
GGAGATGCTGAACCTCAATATCTTCCGGCTACTGGCCGATCTCTCCCATA
TCTCCTCCAAATGTGTCTTGATATGGGCTATCCATCGCAATAAGAGCGCA
GAAGACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTGTTCTCC
CTCAATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATCGATTCA
TACTACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCTCAATTG
GCTTGTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTGCAGACC
TCTACGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGGGTTTAC
TACTCCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGACTCGGA
AGATTTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCCGGCAGC
GAAGGAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTGGAGGAT
GAGGAAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGGAGCAAG
GGGGATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTGGGACAA
GCCAAGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGACGAGTCT
CCCTTCTGACGCAGATGCTCTATGCTTTGGTGTTCGTGACTCGTTATCTC
GACCTTTTCTCGAAGGCAGGATGGAAGCACTTCTACCTCGTATTCTTCAA
GCTATTTTATATCATCTCCTCGTTCTACGTTATATACCTGATGATGAGAG
TATTTCCCCGGACACGGGAAAGGGAGCGAGCCTGGAAGATGGCTATAATA
TCGGTCGCTCTATCTCTGGTTCTGGCTCCTATATCTATTGTCATCTTCTA
TCGTGGTTATCCCGATAGATGGTTCACGGAGATGCTGAACCTCAATATCT
TCCGGCTACTGGCCGATCTCTCCCATATCTCCTCCAAATGTGTCTTGATA
TGGGCTATCCATCGCAATAAGAGCGCAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046923 | ER retention sequence binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006621 | protein retention in ER lumen |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR000133 |
| DBxref | PFAM:PF00810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1633359..1634408 - |
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