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ASPNIDRAFT_182430-T1, ASPNIDRAFT_182430-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_182430-T1
Unique NameASPNIDRAFT_182430-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1185265..1186488-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_182430-T1 ID=ASPNIDRAFT_182430-T1|Name=ASPNIDRAFT_182430-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1224bp|location=Sequence derived from alignment at ACJE01000008.1:1185265..1186488- (Aspergillus niger ATCC 1015)
ATGAAGACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCT
GGCTTCCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACC
AGGGTCTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAAC
AGCCCCGTCACCGACGTCACGTCTACCGACATGACCTGCAACGTCAACGG
TGACCAGGCCGCCTCCAAGACCCTCTCCGTCAAGGCCGGTGATGTTGTCA
CCTTCGAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCC
TCCTCCCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGG
CTCCAACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGA
GCTCTGACGAGTGGGCTACCGACATCCTGATCGCCAACAAGGGCAAGCAC
AACATCACCGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGA
GATCATTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACA
TGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCC
TCCGGTGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCT
CTTCGACATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATG
TCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGGATCCTCCTCCGCTGCT
GCTGCTGCTACTACCCCCGCCACCCAGGCCGCCGTCGCGGTCTCTTCCTC
TGCTGCTGCTGTCGTTGAGTCCACCTCTTCCGCCGCCGCCGCCGCCGCTG
CTACCACCGAAGCTGCCGCTCCCGTCGTCAGCTCTGCTGCCCCCGTCCAG
CAGGCCACCTCCGCTGTCACCAGCCAGGCCCAGGCCCCCACCACCTTCGC
CACCTCTTCTAAGTCCTCCAAGACTGCCTGCAAGAACAAGACCAAGTCCA
AGTCCAAGGTTGCTGCTTCCAGCACTGAGGCCGTCGTTGCCCCCGCTCCT
ACTTCCAGCGTCGTCCCTGCTGTCAGTGCCAGCGCTAGCGCTTCCGCTGG
CGGTGTTGCTAAGAAGTACGAGCGCTGCGGTGGTATCAGCCACACTGGCC
CTACCACTTGCGAGAGCGGCTCCGTTTGCAAGAAGTGGAACCCTTACTAC
TACCAGTGCGTTGAGTCTCAGTAA
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Coding sequence (CDS) from alignment at ACJE01000008.1:1185265..1186488-

>ASPNIDRAFT_182430-T1 ID=ASPNIDRAFT_182430-T1|Name=ASPNIDRAFT_182430-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2142bp|location=Sequence derived from alignment at ACJE01000008.1:1185265..1186488- (Aspergillus niger ATCC 1015)
GCCGTCGTTGCCCCCGCTCCTACTTCCAGCGTCGTCCCTGCTGTCAGTGC
CAGCGCTAGCGCTTCCGCTGGCGGTGTTGCTAAGAAGTACGAGCGCTGCG
GTGGTATCAGCCACACTGGCCCTACCACTTGCGAGAGCGGCTCCGTTTGC
AAGAAGTGGAACCCTTACTACTACCAGTGCGTTGAGTCTCAGTAAATGAA
GACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCTGGCTT
CCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACCAGGGT
CTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAACAGCCC
CGTCACCGACGTCACGTCTACCGACATGACCTGCAACGTCAACGGTGACC
AGGCCGCCTCCAAGACCCTCTCCGTCAAGGCCGGTGATGTTGTCACCTTC
GAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCCTCCTC
CCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGGCTCCA
ACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGAGCTCT
GACGAGTGGGCTACCGACATCCTGATCGCCAACAAGGGCAAGCACAACAT
CACCGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGAGATCA
TTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACATGGAG
TGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCCTCCGG
TGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCTCTTCG
ACATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATGTCTGG
GATGGCTCCAGCTCCGGCTCCAGCTCCGGATCCTCCTCCGCTGCTGCTGC
TGCTACTACCCCCGCCACCCAGGCCGCCGTCGCGGTCTCTTCCTCTGCTG
CTGCTGTCGTTGAGTCCACCTCTTCCGCCGCCGCCGCCGCCGCTGCTACC
ACCGAAGCTGCCGCTCCCGTCGCCGTCGTTGCCCCCGCTCCTACTTCCAG
CGTCGTCCCTGCTGTCAGTGCCAGCGCTAGCGCTTCCGCTGGCGGTGTTG
CTAAGAAGTACGAGCGCTGCGGTGGTATCAGCCACACTGGCCCTACCACT
TGCGAGAGCGGCTCCGTTTGCAAGAAGTGGAACCCTTACTACTACCAGTG
CGTTGAGTCTCAGTAAATGAAGACTACCACCTACAGTTTGCTCGCTCTGG
CAGCGGCTTCCAAGCTGGCTTCCGCCCACACCACCGTCCAGGCCGTCTGG
ATCAACGGCGAGGACCAGGGTCTCGGTAACTCCGCCGATGGCTACATCCG
CAGTCCCCCCAGCAACAGCCCCGTCACCGACGTCACGTCTACCGACATGA
CCTGCAACGTCAACGGTGACCAGGCCGCCTCCAAGACCCTCTCCGTCAAG
GCCGGTGATGTTGTCACCTTCGAGTGGCACCACAGCGACCGCTCCGACTC
CGACGACATCATCGCCTCCTCCCACAAGGGTCCCGTCCAGGTCTACATGG
CCCCGACGGCCAAGGGCTCCAACGGCAACAACTGGGTCAAGATCGCCGAG
GACGGATACCACAAGAGCTCTGACGAGTGGGCTACCGACATCCTGATCGC
CAACAAGGGCAAGCACAACATCACCGTTCCCGACGTTCCCGCCGGTAACT
ACCTCTTCCGCCCTGAGATCATTGCCCTCCACGAGGGTAACCGCGAGGGT
GGTGCCCAGTTCTACATGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGG
CTCCAGCGAGCTTCCCTCCGGTGTCTCCATCCCCGGCGTCTACACCGCCA
CTGACCCCGGTATCCTCTTCGACATCTACAACTCCTTCGACAGCTACCCC
ATCCCCGGCCCGGATGTCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGG
ATCCTCCTCCGCTGCTGCTGCTGCTACTACCCCCGCCACCCAGGCCGCCG
TCGCGGTCTCTTCCTCTGCTGCTGCTGTCGTTGAGTCCACCTCTTCCGCC
GCCGCCGCCGCCGCTGCTACCACCGAAGCTGCCGCTCCCGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_182430ASPNIDRAFT_182430Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_182430-T1ASPNIDRAFT_182430-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_182430-T1.cdsASPNIDRAFT_182430-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_182430-T1.exon2ASPNIDRAFT_182430-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_182430-T1.exon1ASPNIDRAFT_182430-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Productendoglucanase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1185265..1186488 -
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