|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:64465..65873+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_183608-T1 ID=ASPNIDRAFT_183608-T1|Name=ASPNIDRAFT_183608-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1409bp|location=Sequence derived from alignment at ACJE01000013.1:64465..65873+ (Aspergillus niger ATCC 1015)
ATGAAGCAGTTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGTCTGTGT
GGCAGTCTTCACTGATATCTTTCTCTATGGACTAGTCGTACCCATGCTTC
CCTTTGCCCTCGCCGAGCGTGTGGGCCTCACTGATGCCGATATTCAGCAT
TGGAATTCCATCTTACTTGCCAGCTACGGGGCGTCCATCATGCTGGGGTC
ATGTGAGCTATTCATTATTAGCCGGACTGACCCTTACCACAGACACCTCC
TTACTCATTCATGGTTACAGTGCTTTTTGGATGGATGGGCGATCGAACCC
GCACGAAGCAGCTACCATTTTTGCTCGGGGTCGGGGTTATGGGAGGTGCG
ACACTGCTCTTCTCACTTACCAGATCATTGGCCGTGATCCTTCTCGCTCG
AATCCTGCAGGGCTGTTCGACTGCCATAGTATTTACAATTGGATTTAGTC
TAATGCTGGACACAGTTGGGGAGCAACACATTGGACGTGCCATCGGCTTT
ACGAGCATGAGCCTCAGCGTTGGTTTATTCGCAGGACCCATCGTGGGTGG
TTTTTTGTACGACCTGGCTGGATACTTCGCTGTCTTTGTCCCAGCCTTTG
TGCTTGTCGTACTGGAGTTTGTCCTTCGGGTGCTTCTCATCAGGCCGTCG
CTGAAAACTGATAACAAGCGAAACCTCACCGAGGAGGAGAGACGTCCATT
GATGACGGATGCCGCGGGAACTCCCACCACAGTGTCGCCAAGGAAGCCTG
CACTTTTATACTTGCTATGCATGCCTAGGTTCATTACCGCGATGACGGGA
ATGTTCATGCTGAACTCGTTCATGACTGCCTTGGAGGCTGTGCTACCTGT
GTATCTCCCTCAAGTTTTCCCTTACCGGTCGACGGAGATCGCCATTGTAT
TTCTGTCCAATACACTGCCCATGATTTGCTCTCCAATCGGCGGAGCTGTG
GTAGATCGCATGGGTCCGTTCTGGCCGGCGGTCCTCGGATTTACCTTGAT
TACCCCTAGCATGATGTTACTGTCGCTGGTCCGTGAGCCGGAAATGATCA
TGTCTGTGCTGCTTCGACTGTTCTTGTTCCTGTTCGGCTGTGGGGTATCT
CTTGCCATGCCTGCCATGATGACAGAAATTACACTAGCCAAAGACGACAT
GGAGGATGGATATCCGGGAATCTTTGGAGATGGAGGCGCCTCTTCACAGG
CTTACGGTCTGAGTAATGCTGCGTTTGCTGCAGGGACACTGGTTGGGCCT
TTGTATGCTGGATATATTCGAGAGAGTGTGAGTTGGAGTGCAATGGTTAT
TTCCTTGGGAGCCTTCAGTGCCTTGATGGTAGTCTTCGTTGTTGCATTTA
CTCCGCTGAAAGGTCGCGTGTTACACGGGAGCCGGGTGCCTGATTCAACA
AGGCAATGA back to topCoding sequence (CDS) from alignment at ACJE01000013.1:64465..65873+ >ASPNIDRAFT_183608-T1 ID=ASPNIDRAFT_183608-T1|Name=ASPNIDRAFT_183608-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2682bp|location=Sequence derived from alignment at ACJE01000013.1:64465..65873+ (Aspergillus niger ATCC 1015)
ATGAAGCAGTTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGTCTGTGT
GGCAGTCTTCACTGATATCTTTCTCTATGGACTAGTCGTACCCATGCTTC
CCTTTGCCCTCGCCGAGCGTGTGGGCCTCACTGATGCCGATATTCAGCAT
TGGAATTCCATCTTACTTGCCAGCTACGGGGCGTCCATCATGCTGGGGTC
ATTGCTTTTTGGATGGATGGGCGATCGAACCCGCACGAAGCAGCTACCAT
TTTTGCTCGGGGTCGGGGTTATGGGAGGTGCGACACTGCTCTTCTCACTT
ACCAGATCATTGGCCGTGATCCTTCTCGCTCGAATCCTGCAGGGCTGTTC
GACTGCCATAGTATTTACAATTGGATTTAGTCTAATGCTGGACACAGTTG
GGGAGCAACACATTGGACGTGCCATCGGCTTTACGAGCATGAGCCTCAGC
GTTGGTTTATTCGCAGGACCCATCGTGGGTGGTTTTTTGTACGACCTGGC
TGGATACTTCGCTGTCTTTGTCCCAGCCTTTGTGCTTGTCGTACTGGAGT
TTGTCCTTCGGGTGCTTCTCATCAGGCCGTCGCTGAAAACTGATAACAAG
CGAAACCTCACCGAGGAGGAGAGACGTCCATTGATGACGGATGCCGCGGG
AACTCCCACCACAGTGTCGCCAAGGAAGCCTGCACTTTTATACTTGCTAT
GCATGCCTAGGTTCATTACCGCGATGACGGGAATGTTCATGCTGAACTCG
TTCATGACTGCCTTGGAGGCTGTGCTACCTGTGTATCTCCCTCAAGTTTT
CCCTTACCGGTCGACGGAGATCGCCATTGTATTTCTGTCCAATACACTGC
CCATGATTTGCTCTCCAATCGGCGGAGCTGTGGTAGATCGCATGGGTCCG
TTCTGGCCGGCGGTCCTCGGATTTACCTTGATTACCCCTAGCATGATGTT
ACTGTCGCTGGTCCGTGAGCCGGAAATGATCATGTCTGTGCTGCTTCGAC
TGTTCTTGTTCCTGTTCGGCTGTGGGGTATCTCTTGCCATGCCTGCCATG
ATGACAGAAATTACACTAGCCAAAGACGACATGGAGGATGGATATCCGGG
AATCTTTGGAGATGGAGGCGCCTCTTCACAGGCTTACGGTCTGAGTAATG
CTGCGTTTGCTGCAGGGACACTGGTTGGGCCTTTGTATGCTGGATATATT
CGAGAGAGTGTGAGTTGGAGTGCAATGGTTATTTCCTTGGGAGCCTTCAG
TGCCTTGATGGTAGTCTTCGTTGTTGCATTTACTCCGCTGAAAGGTCGCG
TGTTACACGGGAGCCGGGTGCCTGATTCAACAAGGCAATGAATGAAGCAG
TTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGTCTGTGTGGCAGTCTT
CACTGATATCTTTCTCTATGGACTAGTCGTACCCATGCTTCCCTTTGCCC
TCGCCGAGCGTGTGGGCCTCACTGATGCCGATATTCAGCATTGGAATTCC
ATCTTACTTGCCAGCTACGGGGCGTCCATCATGCTGGGGTCATTGCTTTT
TGGATGGATGGGCGATCGAACCCGCACGAAGCAGCTACCATTTTTGCTCG
GGGTCGGGGTTATGGGAGGTGCGACACTGCTCTTCTCACTTACCAGATCA
TTGGCCGTGATCCTTCTCGCTCGAATCCTGCAGGGCTGTTCGACTGCCAT
AGTATTTACAATTGGATTTAGTCTAATGCTGGACACAGTTGGGGAGCAAC
ACATTGGACGTGCCATCGGCTTTACGAGCATGAGCCTCAGCGTTGGTTTA
TTCGCAGGACCCATCGTGGGTGGTTTTTTGTACGACCTGGCTGGATACTT
CGCTGTCTTTGTCCCAGCCTTTGTGCTTGTCGTACTGGAGTTTGTCCTTC
GGGTGCTTCTCATCAGGCCGTCGCTGAAAACTGATAACAAGCGAAACCTC
ACCGAGGAGGAGAGACGTCCATTGATGACGGATGCCGCGGGAACTCCCAC
CACAGTGTCGCCAAGGAAGCCTGCACTTTTATACTTGCTATGCATGCCTA
GGTTCATTACCGCGATGACGGGAATGTTCATGCTGAACTCGTTCATGACT
GCCTTGGAGGCTGTGCTACCTGTGTATCTCCCTCAAGTTTTCCCTTACCG
GTCGACGGAGATCGCCATTGTATTTCTGTCCAATACACTGCCCATGATTT
GCTCTCCAATCGGCGGAGCTGTGGTAGATCGCATGGGTCCGTTCTGGCCG
GCGGTCCTCGGATTTACCTTGATTACCCCTAGCATGATGTTACTGTCGCT
GGTCCGTGAGCCGGAAATGATCATGTCTGTGCTGCTTCGACTGTTCTTGT
TCCTGTTCGGCTGTGGGGTATCTCTTGCCATGCCTGCCATGATGACAGAA
ATTACACTAGCCAAAGACGACATGGAGGATGGATATCCGGGAATCTTTGG
AGATGGAGGCGCCTCTTCACAGGCTTACGGTCTGAGTAATGCTGCGTTTG
CTGCAGGGACACTGGTTGGGCCTTTGTATGCTGGATATATTCGAGAGAGT
GTGAGTTGGAGTGCAATGGTTATTTCCTTGGGAGCCTTCAGTGCCTTGAT
GGTAGTCTTCGTTGTTGCATTTACTCCGCTGAAAGGTCGCGTGTTACACG
GGAGCCGGGTGCCTGATTCAACAAGGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | InterPro:IPR001958 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:64465..65873 + |
|
