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ASPNIDRAFT_184209-T1, ASPNIDRAFT_184209-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_184209-T1
Unique NameASPNIDRAFT_184209-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:368108..368936+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_184209-T1 ID=ASPNIDRAFT_184209-T1|Name=ASPNIDRAFT_184209-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=829bp|location=Sequence derived from alignment at ACJE01000013.1:368108..368936+ (Aspergillus niger ATCC 1015)
ATGTCCCTCAAAGGTAAAGTCGCCATTGTCACTGGCGGAGCCCGCGGAAT
CGGCGCCGGCATTGTCCGCAGTTTGAGCGAACAGGGTGCAAAGGTATCGT
GATCATATACTAATTTTCTGCCGAAACTTGATAGTTTTACTGACATTGAA
GCAGGTCGCATTCAACTACGTCTCCTCATCTTCGCGCAAAGCCGCAGATG
CGCTTATCGAATCACTCCGACAAAACAACAATGAAGCCACTGCAGTTCAA
GCCGACATCACCGACCCAAATGCCCCGAAGATGATCATACAAGCGGCCCT
TGAGGCATTCCAGACAGACCGGATTGACATTCTTGTGAACAATGCTGGCG
CGGGTGATAACCGGCCCCTGGAGGAAGTAACCATGGACAGCTATATGCGA
CTAATGGATGTCAACGTGCGAGCAGTCATCTTCATGACGCAGGCCATACT
TCCATACATTCCCCGCGGAGGTCGGATTATCAACTTGTCTTCTATCTCTT
CTAGGGGCGGTTACGCCACCCAATCTGTGTATGCAGCCAGTAAGGCAGCA
GTGGAGGGTCTTACGCGGGTGTGGGCAACAGAGCTGGGCCATAAGTATGG
AGTGACCGTGAATGCGGCCAATCCGGGACCTGTTGATACAGATATGTACC
AGGCAGCCGGAGAAGTACATCTGAAGCGGATGGAGGAGCAAAACAAGAAG
GTTCCAGCTGGGCAGCGATGTGGAACTGTGCAAGATATCGGGGATATTGT
GTCGTTTTTGGCTGAAGAAAGGTCCCGATGGGTGACAGGCGATGTGATAT
GTGCTAATGGTGGGATGTTGTATATCTAG
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Coding sequence (CDS) from alignment at ACJE01000013.1:368108..368936+

>ASPNIDRAFT_184209-T1 ID=ASPNIDRAFT_184209-T1|Name=ASPNIDRAFT_184209-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1536bp|location=Sequence derived from alignment at ACJE01000013.1:368108..368936+ (Aspergillus niger ATCC 1015)
ATGTCCCTCAAAGGTAAAGTCGCCATTGTCACTGGCGGAGCCCGCGGAAT
CGGCGCCGGCATTGTCCGCAGTTTGAGCGAACAGGGTGCAAAGGTCGCAT
TCAACTACGTCTCCTCATCTTCGCGCAAAGCCGCAGATGCGCTTATCGAA
TCACTCCGACAAAACAACAATGAAGCCACTGCAGTTCAAGCCGACATCAC
CGACCCAAATGCCCCGAAGATGATCATACAAGCGGCCCTTGAGGCATTCC
AGACAGACCGGATTGACATTCTTGTGAACAATGCTGGCGCGGGTGATAAC
CGGCCCCTGGAGGAAGTAACCATGGACAGCTATATGCGACTAATGGATGT
CAACGTGCGAGCAGTCATCTTCATGACGCAGGCCATACTTCCATACATTC
CCCGCGGAGGTCGGATTATCAACTTGTCTTCTATCTCTTCTAGGGGCGGT
TACGCCACCCAATCTGTGTATGCAGCCAGTAAGGCAGCAGTGGAGGGTCT
TACGCGGGTGTGGGCAACAGAGCTGGGCCATAAGTATGGAGTGACCGTGA
ATGCGGCCAATCCGGGACCTGTTGATACAGATATGTACCAGGCAGCCGGA
GAAGTACATCTGAAGCGGATGGAGGAGCAAAACAAGAAGGTTCCAGCTGG
GCAGCGATGTGGAACTGTGCAAGATATCGGGGATATTGTGTCGTTTTTGG
CTGAAGAAAGGTCCCGATGGGTGACAGGCGATGTGATATGTGCTAATGGT
GGGATGTTGTATATCTAGATGTCCCTCAAAGGTAAAGTCGCCATTGTCAC
TGGCGGAGCCCGCGGAATCGGCGCCGGCATTGTCCGCAGTTTGAGCGAAC
AGGGTGCAAAGGTCGCATTCAACTACGTCTCCTCATCTTCGCGCAAAGCC
GCAGATGCGCTTATCGAATCACTCCGACAAAACAACAATGAAGCCACTGC
AGTTCAAGCCGACATCACCGACCCAAATGCCCCGAAGATGATCATACAAG
CGGCCCTTGAGGCATTCCAGACAGACCGGATTGACATTCTTGTGAACAAT
GCTGGCGCGGGTGATAACCGGCCCCTGGAGGAAGTAACCATGGACAGCTA
TATGCGACTAATGGATGTCAACGTGCGAGCAGTCATCTTCATGACGCAGG
CCATACTTCCATACATTCCCCGCGGAGGTCGGATTATCAACTTGTCTTCT
ATCTCTTCTAGGGGCGGTTACGCCACCCAATCTGTGTATGCAGCCAGTAA
GGCAGCAGTGGAGGGTCTTACGCGGGTGTGGGCAACAGAGCTGGGCCATA
AGTATGGAGTGACCGTGAATGCGGCCAATCCGGGACCTGTTGATACAGAT
ATGTACCAGGCAGCCGGAGAAGTACATCTGAAGCGGATGGAGGAGCAAAA
CAAGAAGGTTCCAGCTGGGCAGCGATGTGGAACTGTGCAAGATATCGGGG
ATATTGTGTCGTTTTTGGCTGAAGAAAGGTCCCGATGGGTGACAGGCGAT
GTGATATGTGCTAATGGTGGGATGTTGTATATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184209ASPNIDRAFT_184209Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184209-T1.exon1ASPNIDRAFT_184209-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_184209-T1.exon2ASPNIDRAFT_184209-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184209-T1.cdsASPNIDRAFT_184209-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184209-T1ASPNIDRAFT_184209-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:368108..368936 +
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