You are here

Home

ASPNIDRAFT_185723-T1, ASPNIDRAFT_185723-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_185723-T1
Unique NameASPNIDRAFT_185723-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:937404..937878+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_185723-T1 ID=ASPNIDRAFT_185723-T1|Name=ASPNIDRAFT_185723-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=475bp|location=Sequence derived from alignment at ACJE01000006.1:937404..937878+ (Aspergillus niger ATCC 1015)
ATGCAGGTCACTCACATTGTCCTACTCCAATTCAACCCCGACGTTACTCC
CGAGGTTAGGGAGAATGTGCGTTTGTCCTACACCTCTTACCACACCTTAT
ACCGCCAGATCCTAGACATCTAACTCGATCCTCGTATAGGTCGCAGCCCA
GGTCAGGGACCTGCGCGAATCATGCATCCACCCGGAAACTGGCAAGCCGT
ACATCGTTTCCATGAAGGCCGGCGCTGATGTCTCGATCGAGGGGCTGCAG
GTGCGTTTACTTCCTAGCTTCTGATCCTATGACTGGTAAACATAACTTCT
AACCTTGTCTGAATAGAACGGCATCAGCCATGCATTCGTCTCCGTTTTCG
AAAACACCGCGGATCGCGACTACTTTGTGAACAAGGATCCGGCGCACATT
GCGCTTGTGCAGAATGTCAAGCATTATCTGGCTAAGGTTCAGGTCGTGGA
TTTTGTTGATGGGAAGCTTGTTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:937404..937878+

>ASPNIDRAFT_185723-T1 ID=ASPNIDRAFT_185723-T1|Name=ASPNIDRAFT_185723-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=999bp|location=Sequence derived from alignment at ACJE01000006.1:937404..937878+ (Aspergillus niger ATCC 1015)
ATGCAGGTCACTCACATTGTCCTACTCCAATTCAACCCCGACGTTACTCC
CGAGGTTAGGGAGAATGTGCCCCAGGTCAGGGACCTGCGCGAATCATGCA
TCCACCCGGAAACTGGCAAGCCGTACATCGTTTCCATGAAGGCCGGCGCT
GATGTCTCGATCGAGGGGCTGCAGAACGGCATCAGCCATGCATTCGTCTC
CGTTTTCGAAAACACCGCGGATCGCGACTACTTTGTGAACAAGGATCCGG
CGCACATTGCGCTTGTGCAGAATGTCAAGCATTATCTGGCTAAGGTTCAG
GTCGTGGATTTTGTTGATGGGAAGCTTGTTTAAATGCAGGTCACTCACAT
TGTCCTACTCCAATTCAACCCCGACGTTACTCCCGAGGTTAGGGAGAATG
TGCCCCAGGTCAGGGACCTGCGCGAATCATGCATCCACCCGGAAACTGGC
AAGCCGTACATCGTTTCCATGAAGGCCGGCGCTGATGTCTCGATCGAGGG
GCTGCAGAACGGCATCAGCCATGCATTCGTCTCCGTTTTCGAAAACACCG
CGGATCGCGACTACTTTGTGAACAAGGATCCGGCGCACATTGCGCTTGTG
CAGAATGTCAAGCATTATCTGGCTAAGGTTCAGGTCGTGGATTTTGTTGA
TGGGAAGCTTGTTTAAATGCAGGTCACTCACATTGTCCTACTCCAATTCA
ACCCCGACGTTACTCCCGAGGTTAGGGAGAATGTGCCCCAGGTCAGGGAC
CTGCGCGAATCATGCATCCACCCGGAAACTGGCAAGCCGTACATCGTTTC
CATGAAGGCCGGCGCTGATGTCTCGATCGAGGGGCTGCAGAACGGCATCA
GCCATGCATTCGTCTCCGTTTTCGAAAACACCGCGGATCGCGACTACTTT
GTGAACAAGGATCCGGCGCACATTGCGCTTGTGCAGAATGTCAAGCATTA
TCTGGCTAAGGTTCAGGTCGTGGATTTTGTTGATGGGAAGCTTGTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185723ASPNIDRAFT_185723Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185723-T1.exon1ASPNIDRAFT_185723-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185723-T1.exon2ASPNIDRAFT_185723-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185723-T1.exon3ASPNIDRAFT_185723-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185723-T1.cdsASPNIDRAFT_185723-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185723-T1ASPNIDRAFT_185723-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR013097
DBxrefPFAM:PF07876
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:937404..937878 +
Powered by Drupal