You are here

Home

ASPNIDRAFT_187292-T1, ASPNIDRAFT_187292-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_187292-T1
Unique NameASPNIDRAFT_187292-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1087835..1088906-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_187292-T1 ID=ASPNIDRAFT_187292-T1|Name=ASPNIDRAFT_187292-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1072bp|location=Sequence derived from alignment at ACJE01000020.1:1087835..1088906- (Aspergillus niger ATCC 1015)
ATGTCCGTCCCCCAGACCATGAAGGCCGTCTTGGTCGAGAAGCTCGGTGG
CCCCGAGGTCCTCGAGTTCAAGCCCAACCACCCTGTCCCCACGCCCAAGG
AAGGCCAAGTCCTCGTGAAGAACAACATCTCTGGCATCAACTACATCGAC
ACGTATTTCCGCACAGGCCTCTACCCCTCCGCAAAGCCCGAGATTCTCGG
TCGCGAGGGTGCCGGTACCATTGTCGCTCTGGGCGACGGCCCCAACCCCT
ACAACTTCCAGGTTGGAGATCGGGTGGCCTGGCTCAGCACTGGCGGATAT
GCCGAGTACACGGCGGTGCCGATGGCCAAGACGGTCAAGATCCCCGATGG
AATCACAGATGAGAACCTGATGGCATCATTCCTGAGTGGATTGACGGTCA
TCACGTTGGTGAAGGAGACGTATCCCGTGCAGAAGGATGAGTGGGTGTTG
GTGCATGCTGCGGCTGGCGGGGCGGGAACCCTGATGACGCAGGTGCTGAA
GTCCATTGGTGCTAAGGTCATCGGAACGGCTGGTGGCCCTGAGAAGTGCC
AGCTGGCGAAGAGCCTGGGTGCTGATGTGGTGATCGATTACCGCAGTGAG
GAGGGCAAGGATTGGGTGAAGCAGGTGAAGGAGATTACGGGTGGAAAGGG
AGTTGATGTTGTCTTTGACTCGGTTGGTAAGGATACTTGGGAGGGAAGCT
TGGAGAGCGTTAAGCGCAAGGGTACTATTGTTTGGTTTGGAAATGCCAGT
GGCCCAGTGCCGCCTTTGCCGTTGCAGTAAGTTTTTTCTTATTCTTTCTT
ACTCTTTGTTTGTGGTGTGAGGTGCGATGCTGATCGGTTGGTCGTATAGG
AAACTCTCCCCCAAGTGTGTCAAGGTCGCTCGGCCTCAGCTCTTCGGCTA
CATTGAAACCCGTGAGGAGTTCGAGTTCTACGTTAATGAGCTGTTCTCGC
TTCTCCTGTCTAACAAGCTCAAGGCCAAGGTCCACAAGGTTTACCCCTTG
GAGGAGGTTGCTCAGGCTCACACCGATCTGGAGGGTAGAAAGACCACTGG
CAAGTCGATGCTGAAGCCCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1087835..1088906-

>ASPNIDRAFT_187292-T1 ID=ASPNIDRAFT_187292-T1|Name=ASPNIDRAFT_187292-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1998bp|location=Sequence derived from alignment at ACJE01000020.1:1087835..1088906- (Aspergillus niger ATCC 1015)
GAAACTCTCCCCCAAGTGTGTCAAGGTCGCTCGGCCTCAGCTCTTCGGCT
ACATTGAAACCCGTGAGGAGTTCGAGTTCTACGTTAATGAGCTGTTCTCG
CTTCTCCTGTCTAACAAGCTCAAGGCCAAGGTCCACAAGGTTTACCCCTT
GGAGGAGGTTGCTCAGGCTCACACCGATCTGGAGGGTAGAAAGACCACTG
GCAAGTCGATGCTGAAGCCCTGAATGTCCGTCCCCCAGACCATGAAGGCC
GTCTTGGTCGAGAAGCTCGGTGGCCCCGAGGTCCTCGAGTTCAAGCCCAA
CCACCCTGTCCCCACGCCCAAGGAAGGCCAAGTCCTCGTGAAGAACAACA
TCTCTGGCATCAACTACATCGACACGTATTTCCGCACAGGCCTCTACCCC
TCCGCAAAGCCCGAGATTCTCGGTCGCGAGGGTGCCGGTACCATTGTCGC
TCTGGGCGACGGCCCCAACCCCTACAACTTCCAGGTTGGAGATCGGGTGG
CCTGGCTCAGCACTGGCGGATATGCCGAGTACACGGCGGTGCCGATGGCC
AAGACGGTCAAGATCCCCGATGGAATCACAGATGAGAACCTGATGGCATC
ATTCCTGAGTGGATTGACGGTCATCACGTTGGTGAAGGAGACGTATCCCG
TGCAGAAGGATGAGTGGGTGTTGGTGCATGCTGCGGCTGGCGGGGCGGGA
ACCCTGATGACGCAGGTGCTGAAGTCCATTGGTGCTAAGGTCATCGGAAC
GGCTGGTGGCCCTGAGAAGTGCCAGCTGGCGAAGAGCCTGGGTGCTGATG
TGGTGATCGATTACCGCAGTGAGGAGGGCAAGGATTGGGTGAAGCAGGTG
AAGGAGATTACGGGTGGAAAGGGAGTTGATGTTGTCTTTGACTCGGTTGG
TAAGGATACTTGGGAGGGAAGCTTGGAGAGCGTTAAGCGCAAGGGTACTA
TTGTTTGGTTTGGAAATGCCAGTGGCCCAGTGCCGCCTTTGCCGTTGCAG
AAACTCTCCCCCAAGTGTGTCAAGGTCGCTCGGCCTCAGCTCTTCGGCTA
CATTGAAACCCGTGAGGAGTTCGAGTTCTACGTTAATGAGCTGTTCTCGC
TTCTCCTGTCTAACAAGCTCAAGGCCAAGGTCCACAAGGTTTACCCCTTG
GAGGAGGTTGCTCAGGCTCACACCGATCTGGAGGGTAGAAAGACCACTGG
CAAGTCGATGCTGAAGCCCTGAATGTCCGTCCCCCAGACCATGAAGGCCG
TCTTGGTCGAGAAGCTCGGTGGCCCCGAGGTCCTCGAGTTCAAGCCCAAC
CACCCTGTCCCCACGCCCAAGGAAGGCCAAGTCCTCGTGAAGAACAACAT
CTCTGGCATCAACTACATCGACACGTATTTCCGCACAGGCCTCTACCCCT
CCGCAAAGCCCGAGATTCTCGGTCGCGAGGGTGCCGGTACCATTGTCGCT
CTGGGCGACGGCCCCAACCCCTACAACTTCCAGGTTGGAGATCGGGTGGC
CTGGCTCAGCACTGGCGGATATGCCGAGTACACGGCGGTGCCGATGGCCA
AGACGGTCAAGATCCCCGATGGAATCACAGATGAGAACCTGATGGCATCA
TTCCTGAGTGGATTGACGGTCATCACGTTGGTGAAGGAGACGTATCCCGT
GCAGAAGGATGAGTGGGTGTTGGTGCATGCTGCGGCTGGCGGGGCGGGAA
CCCTGATGACGCAGGTGCTGAAGTCCATTGGTGCTAAGGTCATCGGAACG
GCTGGTGGCCCTGAGAAGTGCCAGCTGGCGAAGAGCCTGGGTGCTGATGT
GGTGATCGATTACCGCAGTGAGGAGGGCAAGGATTGGGTGAAGCAGGTGA
AGGAGATTACGGGTGGAAAGGGAGTTGATGTTGTCTTTGACTCGGTTGGT
AAGGATACTTGGGAGGGAAGCTTGGAGAGCGTTAAGCGCAAGGGTACTAT
TGTTTGGTTTGGAAATGCCAGTGGCCCAGTGCCGCCTTTGCCGTTGCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187292ASPNIDRAFT_187292Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187292-T1ASPNIDRAFT_187292-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187292-T1.cdsASPNIDRAFT_187292-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187292-T1.exon2ASPNIDRAFT_187292-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_187292-T1.exon1ASPNIDRAFT_187292-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002364
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1087835..1088906 -
Powered by Drupal