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ASPNIDRAFT_190724-T1, ASPNIDRAFT_190724-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_190724-T1
Unique NameASPNIDRAFT_190724-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:64183..65608+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_190724-T1 ID=ASPNIDRAFT_190724-T1|Name=ASPNIDRAFT_190724-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1426bp|location=Sequence derived from alignment at ACJE01000016.1:64183..65608+ (Aspergillus niger ATCC 1015)
CTGTTCGCTCTGATTGCGAGTCCGCTAGCGGGAATCCTGGCAGATAAATT
CGGTCGCAGAAAGGTCATTCTCGTTGCAGACGTGCTTTTCACTCTTGGCG
CTTTGATACAAGCTGTCACAAGCGCAGTATGGGGCATGATAGCTGGAAGA
AGCATTGTTGGCCTGGCGGTTGGTGGAGCAAGTCTGGTGACTCCATTGTA
TGTTCAATCCTTACTAAGGGTGTCCCTCGAAGGAGTATAGTAGGGAGGAA
TAAAGTTGTCCTTTTGTCTAACATATCTCCAGATATATATCCGAGTTGGC
ACCTTCTCATGCTAGAGGAAGGCTTGTGACGATACTGAGTCTTTTTATTA
CAGGCGGACAAGTCGTTGCTTATATCATCGGCTGGTTATTCTCCTCTGTA
TCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAATGCTCCCAGCAGTTTT
TCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCCCTCGGTGGCTGGTCC
AAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTCTCCCGGGTCTACGGG
AGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGTTATGCGTGATATCCA
GCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTCAAACCAATAAGCCCT
CCACAGGGAATTGGCAGTGGCTGACGAACGTTACGCAGTGTGCTCGCCAC
TTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGATTATAGCGGTTATGCT
GCAAGCCACACAACAATTGTGTGGATTCAATAGTCTCATGTATTTCTCGG
CGACAATTTTCTCCATGCTGTCGTTTTCATCACCAACACTCGTGTCATTG
TCGGTGGCGTTGACCAATTTCTTATTCACCTTACTCGCATTTGCCTTTAT
CGATAGGATTGGTCGGCGCCGCATCCTCCTGTACTCAATGCCAGTGATGG
CTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGCTCAGTCGAAATGCCG
AACCCCGAGTCAAGGGTACGAGCGGAAGATGCCACAATTGATAGCGCTTT
CCTTCCTATTGTTATCTTGATATGCCTCACCGTTTATGTGGGAGCTTATG
CATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCAGAGCTCTTCCCCTTG
AATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGCCACGAATTGGGGGTC
AAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGATGGAATGGCTCTCAC
CTGGATGGACATTTGCGGCCTATGCGGCCGTATGTGTGTTCGGTTGGTTT
GGTGTATACGCTATCTATCCCGAGATGAGCGGGCTTCGCTTGGAGGAAGT
CAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGGAAAGTTTAAGAAGAC
GTCGTGGTCGTCCCGATGTGAGCTAA
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Coding sequence (CDS) from alignment at ACJE01000016.1:64183..65608+

>ASPNIDRAFT_190724-T1 ID=ASPNIDRAFT_190724-T1|Name=ASPNIDRAFT_190724-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2682bp|location=Sequence derived from alignment at ACJE01000016.1:64183..65608+ (Aspergillus niger ATCC 1015)
CTGTTCGCTCTGATTGCGAGTCCGCTAGCGGGAATCCTGGCAGATAAATT
CGGTCGCAGAAAGGTCATTCTCGTTGCAGACGTGCTTTTCACTCTTGGCG
CTTTGATACAAGCTGTCACAAGCGCAGTATGGGGCATGATAGCTGGAAGA
AGCATTGTTGGCCTGGCGGTTGGTGGAGCAAGTCTGGTGACTCCATTATA
TATATCCGAGTTGGCACCTTCTCATGCTAGAGGAAGGCTTGTGACGATAC
TGAGTCTTTTTATTACAGGCGGACAAGTCGTTGCTTATATCATCGGCTGG
TTATTCTCCTCTGTATCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAAT
GCTCCCAGCAGTTTTTCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCC
CTCGGTGGCTGGTCCAAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTC
TCCCGGGTCTACGGGAGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGT
TATGCGTGATATCCAGCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTC
AAACCAATAAGCCCTCCACAGGGAATTGGCAGTGGCTGACGAACGTTACG
CAGTGTGCTCGCCACTTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGAT
TATAGCGGTTATGCTGCAAGCCACACAACAATTGTGTGGATTCAATAGTC
TCATGTATTTCTCGGCGACAATTTTCTCCATGCTGTCGTTTTCATCACCA
ACACTCGTGTCATTGTCGGTGGCGTTGACCAATTTCTTATTCACCTTACT
CGCATTTGCCTTTATCGATAGGATTGGTCGGCGCCGCATCCTCCTGTACT
CAATGCCAGTGATGGCTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGC
TCAGTCGAAATGCCGAACCCCGAGTCAAGGGTACGAGCGGAAGATGCCAC
AATTGATAGCGCTTTCCTTCCTATTGTTATCTTGATATGCCTCACCGTTT
ATGTGGGAGCTTATGCATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCA
GAGCTCTTCCCCTTGAATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGC
CACGAATTGGGGGTCAAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGA
TGGAATGGCTCTCACCTGGATGGACATTTGCGGCCTATGCGGCCGTATGT
GTGTTCGGTTGGTTTGGTGTATACGCTATCTATCCCGAGATGAGCGGGCT
TCGCTTGGAGGAAGTCAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGG
AAAGTTTAAGAAGACGTCGTGGTCGTCCCGATGTGAGCTAACTGTTCGCT
CTGATTGCGAGTCCGCTAGCGGGAATCCTGGCAGATAAATTCGGTCGCAG
AAAGGTCATTCTCGTTGCAGACGTGCTTTTCACTCTTGGCGCTTTGATAC
AAGCTGTCACAAGCGCAGTATGGGGCATGATAGCTGGAAGAAGCATTGTT
GGCCTGGCGGTTGGTGGAGCAAGTCTGGTGACTCCATTATATATATCCGA
GTTGGCACCTTCTCATGCTAGAGGAAGGCTTGTGACGATACTGAGTCTTT
TTATTACAGGCGGACAAGTCGTTGCTTATATCATCGGCTGGTTATTCTCC
TCTGTATCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAATGCTCCCAGC
AGTTTTTCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCCCTCGGTGGC
TGGTCCAAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTCTCCCGGGTC
TACGGGAGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGTTATGCGTGA
TATCCAGCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTCAAACCAATA
AGCCCTCCACAGGGAATTGGCAGTGGCTGACGAACGTTACGCAGTGTGCT
CGCCACTTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGATTATAGCGGT
TATGCTGCAAGCCACACAACAATTGTGTGGATTCAATAGTCTCATGTATT
TCTCGGCGACAATTTTCTCCATGCTGTCGTTTTCATCACCAACACTCGTG
TCATTGTCGGTGGCGTTGACCAATTTCTTATTCACCTTACTCGCATTTGC
CTTTATCGATAGGATTGGTCGGCGCCGCATCCTCCTGTACTCAATGCCAG
TGATGGCTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGCTCAGTCGAA
ATGCCGAACCCCGAGTCAAGGGTACGAGCGGAAGATGCCACAATTGATAG
CGCTTTCCTTCCTATTGTTATCTTGATATGCCTCACCGTTTATGTGGGAG
CTTATGCATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCAGAGCTCTTC
CCCTTGAATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGCCACGAATTG
GGGGTCAAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGATGGAATGGC
TCTCACCTGGATGGACATTTGCGGCCTATGCGGCCGTATGTGTGTTCGGT
TGGTTTGGTGTATACGCTATCTATCCCGAGATGAGCGGGCTTCGCTTGGA
GGAAGTCAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGGAAAGTTTAA
GAAGACGTCGTGGTCGTCCCGATGTGAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190724ASPNIDRAFT_190724Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190724-T1.exon1ASPNIDRAFT_190724-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190724-T1.exon2ASPNIDRAFT_190724-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190724-T1.cdsASPNIDRAFT_190724-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190724-T1ASPNIDRAFT_190724-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:64183..65608 +
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