You are here

Home

ASPNIDRAFT_190990-T1, ASPNIDRAFT_190990-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_190990-T1
Unique NameASPNIDRAFT_190990-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:86254..87603+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_190990-T1 ID=ASPNIDRAFT_190990-T1|Name=ASPNIDRAFT_190990-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1350bp|location=Sequence derived from alignment at ACJE01000016.1:86254..87603+ (Aspergillus niger ATCC 1015)
ATGAAGTCATTTCAATTCGCTCGTCGCAGGGCGTTGCAAAGCCTCGTCGC
ACCGCGTGCCTTTCAATCTCCCGCAACGGCTCAGTTATGGAAGAGATGCT
TCAGTGCTACTTCAGCTGCTGCCTCCCAACTAGCCCCCCTTGACCCCTCG
AAACTTACCGTCTCGAAGACGACTACTCCTAAGGAATTGACTGCCCCGAA
GGACTTGGTCTTTGGCAAGACTTTCACCGGTATGACGAGCACGTGTCGCT
TCCAGGCGGTGTCCAGTTTCTAATGCGCATTCTATCTTAGATCATATGCT
GTCGATTGAATGGACCGCGACGGAGGGATGGCACTCCCCCCAGATTGTTC
CGTACCAGAACCTCAGTCTCGACCCGTCGGCTTGTGTTTTCCACTATGCG
TTCGAGTGTTTTGAGGGTATGAAGGCCTACAAAGACGAGTCTGGTCAGAT
CCGCTTGTTCCGTCCCGACAAGAACATGGCGCGCTTGAACAAATCCTCGA
AGCGCATTGCTTTGCCTTCCTTTGATGGCGAGGCCCTCACCAAGCTGATT
GGAGAGTTTGTGAAGCTGGACAGCAGGTTCATCCCAAGGTTGGTGAAAAG
CACACCAATTGATGATTGAGGATAACAACTTACGTTTATATAATTAGTGA
GCGGGGCTACTCACTGTACTTGCGGCCCACGATGATTGGAACTCAAAAGA
CCCTCGGTGTGGGACCCCCGGGCTCTGCTCTTTTGTTCGTGATTGCAAGC
CCGGTTGGCCCGTATTACCCTACTGGCTTCAAGGCCATTTCGTTGGAGGC
TACCGACTATGCTGTCAGAGCCTGGCCTGGTGGTGTTGGCGACAAGAAGC
TGGGTGCCAATTACGCCCCCTGCGTTCTCCCTCAGCTGGAAGCGGCGTCC
CGTGGCTTCCAGCAGAATCTGTGGCTCTTTGGAGAGGAAGAATATATTAC
TGAGGTCGGCACCATGAACCTTTTCGTTGCCTTGAAGAACAAGGAAACTG
GCCAGAAGGAACTGATCACTGCGCCTCTGGACGGAACGATCCTCGAGGGT
GTGACCAGAGACTCCGTGCTGGGGCTGGCCAGGGAAAGGCTGGTGCCCAA
GGGCTGGAACATCTCCGAGCGTAAGCTCAAGATGTCCGAAGTCGCCGAAG
CGGCCGAGGAGGGCAGAATGATCGAGGTGTTCGGTGCCGGTACCGCAGCT
ATTGTCAGTCCCGTGCGGACAATCAGCTACCGGGGTAAGCTGGTCGACTG
CGGCCTGAAGGAAACTGAGGAAGCAGGCGAAATTGCTCTTCAGATGAAGA
ACTGGATCGAGGGTATCCAGTATGGTGATGAGAGTCACCCTTGGAGGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:86254..87603+

>ASPNIDRAFT_190990-T1 ID=ASPNIDRAFT_190990-T1|Name=ASPNIDRAFT_190990-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3690bp|location=Sequence derived from alignment at ACJE01000016.1:86254..87603+ (Aspergillus niger ATCC 1015)
ATGAAGTCATTTCAATTCGCTCGTCGCAGGGCGTTGCAAAGCCTCGTCGC
ACCGCGTGCCTTTCAATCTCCCGCAACGGCTCAGTTATGGAAGAGATGCT
TCAGTGCTACTTCAGCTGCTGCCTCCCAACTAGCCCCCCTTGACCCCTCG
AAACTTACCGTCTCGAAGACGACTACTCCTAAGGAATTGACTGCCCCGAA
GGACTTGGTCTTTGGCAAGACTTTCACCGATCATATGCTGTCGATTGAAT
GGACCGCGACGGAGGGATGGCACTCCCCCCAGATTGTTCCGTACCAGAAC
CTCAGTCTCGACCCGTCGGCTTGTGTTTTCCACTATGCGTTCGAGTGTTT
TGAGGGTATGAAGGCCTACAAAGACGAGTCTGGTCAGATCCGCTTGTTCC
GTCCCGACAAGAACATGGCGCGCTTGAACAAATCCTCGAAGCGCATTGCT
TTGCCTTCCTTTGATGGCGAGGCCCTCACCAAGCTGATTGGAGAGTTTGT
GAAGCTGGACAGCAGGTTCATCCCAAGTGAGCGGGGCTACTCACTGTACT
TGCGGCCCACGATGATTGGAACTCAAAAGACCCTCGGTGTGGGACCCCCG
GGCTCTGCTCTTTTGTTCGTGATTGCAAGCCCGGTTGGCCCGTATTACCC
TACTGGCTTCAAGGCCATTTCGTTGGAGGCTACCGACTATGCTGTCAGAG
CCTGGCCTGGTGGTGTTGGCGACAAGAAGCTGGGTGCCAATTACGCCCCC
TGCGTTCTCCCTCAGCTGGAAGCGGCGTCCCGTGGCTTCCAGCAGAATCT
GTGGCTCTTTGGAGAGGAAGAATATATTACTGAGGTCGGCACCATGAACC
TTTTCGTTGCCTTGAAGAACAAGGAAACTGGCCAGAAGGAACTGATCACT
GCGCCTCTGGACGGAACGATCCTCGAGGGTGTGACCAGAGACTCCGTGCT
GGGGCTGGCCAGGGAAAGGCTGGTGCCCAAGGGCTGGAACATCTCCGAGC
GTAAGCTCAAGATGTCCGAAGTCGCCGAAGCGGCCGAGGAGGGCAGAATG
ATCGAGGTGTTCGGTGCCGGTACCGCAGCTATTGTCAGTCCCGTGCGGAC
AATCAGCTACCGGGGTAAGCTGGTCGACTGCGGCCTGAAGGAAACTGAGG
AAGCAGGCGAAATTGCTCTTCAGATGAAGAACTGGATCGAGGGTATCCAG
TATGGTGATGAGAGTCACCCTTGGAGGTAAATGAAGTCATTTCAATTCGC
TCGTCGCAGGGCGTTGCAAAGCCTCGTCGCACCGCGTGCCTTTCAATCTC
CCGCAACGGCTCAGTTATGGAAGAGATGCTTCAGTGCTACTTCAGCTGCT
GCCTCCCAACTAGCCCCCCTTGACCCCTCGAAACTTACCGTCTCGAAGAC
GACTACTCCTAAGGAATTGACTGCCCCGAAGGACTTGGTCTTTGGCAAGA
CTTTCACCGATCATATGCTGTCGATTGAATGGACCGCGACGGAGGGATGG
CACTCCCCCCAGATTGTTCCGTACCAGAACCTCAGTCTCGACCCGTCGGC
TTGTGTTTTCCACTATGCGTTCGAGTGTTTTGAGGGTATGAAGGCCTACA
AAGACGAGTCTGGTCAGATCCGCTTGTTCCGTCCCGACAAGAACATGGCG
CGCTTGAACAAATCCTCGAAGCGCATTGCTTTGCCTTCCTTTGATGGCGA
GGCCCTCACCAAGCTGATTGGAGAGTTTGTGAAGCTGGACAGCAGGTTCA
TCCCAAGTGAGCGGGGCTACTCACTGTACTTGCGGCCCACGATGATTGGA
ACTCAAAAGACCCTCGGTGTGGGACCCCCGGGCTCTGCTCTTTTGTTCGT
GATTGCAAGCCCGGTTGGCCCGTATTACCCTACTGGCTTCAAGGCCATTT
CGTTGGAGGCTACCGACTATGCTGTCAGAGCCTGGCCTGGTGGTGTTGGC
GACAAGAAGCTGGGTGCCAATTACGCCCCCTGCGTTCTCCCTCAGCTGGA
AGCGGCGTCCCGTGGCTTCCAGCAGAATCTGTGGCTCTTTGGAGAGGAAG
AATATATTACTGAGGTCGGCACCATGAACCTTTTCGTTGCCTTGAAGAAC
AAGGAAACTGGCCAGAAGGAACTGATCACTGCGCCTCTGGACGGAACGAT
CCTCGAGGGTGTGACCAGAGACTCCGTGCTGGGGCTGGCCAGGGAAAGGC
TGGTGCCCAAGGGCTGGAACATCTCCGAGCGTAAGCTCAAGATGTCCGAA
GTCGCCGAAGCGGCCGAGGAGGGCAGAATGATCGAGGTGTTCGGTGCCGG
TACCGCAGCTATTGTCAGTCCCGTGCGGACAATCAGCTACCGGGGTAAGC
TGGTCGACTGCGGCCTGAAGGAAACTGAGGAAGCAGGCGAAATTGCTCTT
CAGATGAAGAACTGGATCGAGGGTATCCAGTATGGTGATGAGAGTCACCC
TTGGAGGTAAATGAAGTCATTTCAATTCGCTCGTCGCAGGGCGTTGCAAA
GCCTCGTCGCACCGCGTGCCTTTCAATCTCCCGCAACGGCTCAGTTATGG
AAGAGATGCTTCAGTGCTACTTCAGCTGCTGCCTCCCAACTAGCCCCCCT
TGACCCCTCGAAACTTACCGTCTCGAAGACGACTACTCCTAAGGAATTGA
CTGCCCCGAAGGACTTGGTCTTTGGCAAGACTTTCACCGATCATATGCTG
TCGATTGAATGGACCGCGACGGAGGGATGGCACTCCCCCCAGATTGTTCC
GTACCAGAACCTCAGTCTCGACCCGTCGGCTTGTGTTTTCCACTATGCGT
TCGAGTGTTTTGAGGGTATGAAGGCCTACAAAGACGAGTCTGGTCAGATC
CGCTTGTTCCGTCCCGACAAGAACATGGCGCGCTTGAACAAATCCTCGAA
GCGCATTGCTTTGCCTTCCTTTGATGGCGAGGCCCTCACCAAGCTGATTG
GAGAGTTTGTGAAGCTGGACAGCAGGTTCATCCCAAGTGAGCGGGGCTAC
TCACTGTACTTGCGGCCCACGATGATTGGAACTCAAAAGACCCTCGGTGT
GGGACCCCCGGGCTCTGCTCTTTTGTTCGTGATTGCAAGCCCGGTTGGCC
CGTATTACCCTACTGGCTTCAAGGCCATTTCGTTGGAGGCTACCGACTAT
GCTGTCAGAGCCTGGCCTGGTGGTGTTGGCGACAAGAAGCTGGGTGCCAA
TTACGCCCCCTGCGTTCTCCCTCAGCTGGAAGCGGCGTCCCGTGGCTTCC
AGCAGAATCTGTGGCTCTTTGGAGAGGAAGAATATATTACTGAGGTCGGC
ACCATGAACCTTTTCGTTGCCTTGAAGAACAAGGAAACTGGCCAGAAGGA
ACTGATCACTGCGCCTCTGGACGGAACGATCCTCGAGGGTGTGACCAGAG
ACTCCGTGCTGGGGCTGGCCAGGGAAAGGCTGGTGCCCAAGGGCTGGAAC
ATCTCCGAGCGTAAGCTCAAGATGTCCGAAGTCGCCGAAGCGGCCGAGGA
GGGCAGAATGATCGAGGTGTTCGGTGCCGGTACCGCAGCTATTGTCAGTC
CCGTGCGGACAATCAGCTACCGGGGTAAGCTGGTCGACTGCGGCCTGAAG
GAAACTGAGGAAGCAGGCGAAATTGCTCTTCAGATGAAGAACTGGATCGA
GGGTATCCAGTATGGTGATGAGAGTCACCCTTGGAGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009081branched-chain amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004084branched-chain-amino-acid transaminase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
BAT1ASPNIDRAFT_190990Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190990-T1.exon1ASPNIDRAFT_190990-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190990-T1.exon2ASPNIDRAFT_190990-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190990-T1.exon3ASPNIDRAFT_190990-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190990-T1.cdsASPNIDRAFT_190990-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190990-T1ASPNIDRAFT_190990-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036038
DBxrefInterPro:IPR033939
DBxrefInterPro:IPR018300
DBxrefInterPro:IPR001544
DBxrefInterPro:IPR005786
DBxrefPFAM:PF01063
ProductMitochondrial branched-chain amino acid (BCAA) aminotransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:86254..87603 +
Powered by Drupal