You are here

Home

ASPNIDRAFT_191511-T1, ASPNIDRAFT_191511-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191511-T1
Unique NameASPNIDRAFT_191511-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:1243458..1244254-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191511-T1 ID=ASPNIDRAFT_191511-T1|Name=ASPNIDRAFT_191511-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=797bp|location=Sequence derived from alignment at ACJE01000015.1:1243458..1244254- (Aspergillus niger ATCC 1015)
ATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCCTGC
GCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCAAGA
ACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGGGGC
GAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGACAG
CGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCGACG
ACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAGCAG
CTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGGTGAGCCAA
TCTTTCCTGTCACGAATGAAGCTATTGTCTAATAATCTTAGCTACACGGG
CAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCACCACTG
ACTCCACAACCGCCACTCACGAATACGAAATCATGATCTGGCTCGCCGCC
TACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGCCAGCCC
CACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACGACTGGA
CAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCGGCCGAC
GTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGTCTCTTCCAG
CTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTGGCTCTG
ATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACTTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000015.1:1243458..1244254-

>ASPNIDRAFT_191511-T1 ID=ASPNIDRAFT_191511-T1|Name=ASPNIDRAFT_191511-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1494bp|location=Sequence derived from alignment at ACJE01000015.1:1243458..1244254- (Aspergillus niger ATCC 1015)
CTACACGGGCAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCT
CCACCACTGACTCCACAACCGCCACTCACGAATACGAAATCATGATCTGG
CTCGCCGCCTACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTAT
CGCCAGCCCCACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCA
ACGACTGGACAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTC
TCGGCCGACGTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGT
CTCTTCCAGCTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGA
CTGGCTCTGATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAAT
ACTTAGATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGT
TCCTGCGCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCA
CCAAGAACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTC
TGGGGCGAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTA
TGACAGCGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCG
GCGACGACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCC
AAGCAGCTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGCTA
CACGGGCAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCA
CCACTGACTCCACAACCGCCACTCACGAATACGAAATCATGATCTGGCTC
GCCGCCTACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGC
CAGCCCCACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACG
ACTGGACAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCG
GCCGACGTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGTCTC
TTCCAGCTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTG
GCTCTGATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACT
TAGATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCC
TGCGCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCA
AGAACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGG
GGCGAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGA
CAGCGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCG
ACGACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAG
CAGCTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191511ASPNIDRAFT_191511Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191511-T1ASPNIDRAFT_191511-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191511-T1.cdsASPNIDRAFT_191511-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191511-T1.exon2ASPNIDRAFT_191511-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191511-T1.exon1ASPNIDRAFT_191511-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000151.9
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH12
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR002594
DBxrefInterPro:IPR013319
DBxrefPFAM:PF01670
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:1243458..1244254 -
Powered by Drupal