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ASPNIDRAFT_191806-T1, ASPNIDRAFT_191806-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191806-T1
Unique NameASPNIDRAFT_191806-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:267928..268228-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191806-T1 ID=ASPNIDRAFT_191806-T1|Name=ASPNIDRAFT_191806-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=301bp|location=Sequence derived from alignment at ACJE01000003.1:267928..268228- (Aspergillus niger ATCC 1015)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGGGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAAGCATTTTACTTTTTAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
A
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Coding sequence (CDS) from alignment at ACJE01000003.1:267928..268228-

>ASPNIDRAFT_191806-T1 ID=ASPNIDRAFT_191806-T1|Name=ASPNIDRAFT_191806-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=330bp|location=Sequence derived from alignment at ACJE01000003.1:267928..268228- (Aspergillus niger ATCC 1015)
GATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACC
TCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCG
TTGAATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTG
TCCTCGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAG
TTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGG
TATGCGATTTCTCCGTTGAATGGATTCCGCCAAGCAGCCCGCTAAGCTCG
TCAAGGTCACCCGTGTCCTCGGCCGTACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28ASPNIDRAFT_191806Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191806-T1ASPNIDRAFT_191806-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191806-T1.cdsASPNIDRAFT_191806-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191806-T1.exon2ASPNIDRAFT_191806-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191806-T1.exon1ASPNIDRAFT_191806-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR000289
DBxrefPFAM:PF01200
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:267928..268228 -
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