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ASPNIDRAFT_191838-T1, ASPNIDRAFT_191838-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191838-T1
Unique NameASPNIDRAFT_191838-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:512627..513605+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191838-T1 ID=ASPNIDRAFT_191838-T1|Name=ASPNIDRAFT_191838-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=979bp|location=Sequence derived from alignment at ACJE01000003.1:512627..513605+ (Aspergillus niger ATCC 1015)
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGTACGTACATACCTCCCCCCCAACGGCAATCCAACCTA
GCAACTCAAGTCCCCCATCAATGTCCATGTCCACTAACCAATCAAACCAG
GGAAATGGCCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACG
GCGGCTTCTGGATCTCCCTATCCATAGTCTTCACTCCAGGCGGATTCGAC
ATCCAGGGCGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTA
CGACGCATTCGGATTATACCTAATGGTATTTCACTCTCCACCCAATCATT
ACCACGAAGTACTAATAATAATCCAGGGCTGGTTCATCTTCACCTTCCTC
CTCTGGCTCTGCACGCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGC
GGCCGTCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTATATCCACCGCA
CTGCGCCAGAGGTTCCCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTT
GCGCTGCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGC
GGACGATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGT
CGGAGAAGGGGAGGGAGTCGAGACGGAAG
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Coding sequence (CDS) from alignment at ACJE01000003.1:512627..513605+

>ASPNIDRAFT_191838-T1 ID=ASPNIDRAFT_191838-T1|Name=ASPNIDRAFT_191838-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2511bp|location=Sequence derived from alignment at ACJE01000003.1:512627..513605+ (Aspergillus niger ATCC 1015)
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGGAAATGGCCGCCGGGAACACCTTCGGCGCAACCGCAC
TCTCCTCCTACGGCGGCTTCTGGATCTCCCTATCCATAGTCTTCACTCCA
GGCGGATTCGACATCCAGGGCGCCTACAAAGCAGCCGATAATGGCAGCAT
GGGGATGTTCTACGACGCATTCGGATTATACCTAATGGGCTGGTTCATCT
TCACCTTCCTCCTCTGGCTCTGCACGCTCAAATCGACCTACGTCTTCTGC
GCCCTCTTCGCGGCCGTCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTA
TATCCACCGCACTGCGCCAGAGGTTCCCAACGCAAAGATCATTAAAGCCG
GTGGGTTGTTTGCGCTGCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTG
GCGGGTATCGCGGACGATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCA
TTTCCCGTGGTCGGAGAAGGGGAGGGAGTCGAGACGGATGTCTTCCACCC
CCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGTGAGAACA
AACACTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACTTCGGGCC
CCTCGCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTCGCCGGCG
AACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGATCGCCAAT
CCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCCTCCTGGG
CTGCATCAACATGCAAACTCTGGGAATCGCCACACCGAACATGATCGTCG
GCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGGCATGTGG
GAAATGGCCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGG
CGGCTTCTGGATCTCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACA
TCCAGGGCGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTAC
GACGCATTCGGATTATACCTAATGGGCTGGTTCATCTTCACCTTCCTCCT
CTGGCTCTGCACGCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCGG
CCGTCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTATATCCACCGCACT
GCGCCAGAGGTTCCCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTTGC
GCTGCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGG
ACGATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCG
GAGAAGGGGAGGGAGTCGAGACGGATGTCTTCCACCCCCAGCTCCCAGGA
GAAACCCCCAACCGCTGAACCAACCCTCGTGAGAACAAACACTTCCACAG
CAACTCCCAATGACTCCTACCACTTCGACTTCGGGCCCCTCGCCCACGTC
AACACAGCAGGAACCATCTATCCCGCCTTCGCCGGCGAACTCCAACCCGG
TCTCTGGAAGCCCCAGAAGCGTCGCAAGATCGCCAATCCCGCACCGTTAG
GACTATGCGGGTTCGCGCTCACTACATTCCTCCTGGGCTGCATCAACATG
CAAACTCTGGGAATCGCCACACCGAACATGATCGTCGGCCCTGCTCTCGC
ATACGGGGGTCTTGTCCAGCTTCTCGCGGGCATGTGGGAAATGGCCGCCG
GGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATC
TCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGGCGCCTA
CAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGAT
TATACCTAATGGGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCACG
CTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCGC
CCTCCTCCTCCTAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTTC
CCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGCC
TTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAG
TTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGG
AGTCGAGACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191838ASPNIDRAFT_191838Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191838-T1.exon1ASPNIDRAFT_191838-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191838-T1.exon2ASPNIDRAFT_191838-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191838-T1.exon3ASPNIDRAFT_191838-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191838-T1.cdsASPNIDRAFT_191838-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191838-T1.utr3p1ASPNIDRAFT_191838-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191838-T1ASPNIDRAFT_191838-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:512627..513605 +
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