You are here

Home

ASPNIDRAFT_191841-T1, ASPNIDRAFT_191841-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191841-T1
Unique NameASPNIDRAFT_191841-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:578797..579858+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191841-T1 ID=ASPNIDRAFT_191841-T1|Name=ASPNIDRAFT_191841-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1062bp|location=Sequence derived from alignment at ACJE01000003.1:578797..579858+ (Aspergillus niger ATCC 1015)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGGTGGGTGATCTCAGCGAATATATATCCCGGACCGTGGCGTGACTCCTA
TTTAAAAGTACTCCGAATGTACGACTGATATCTATTCTGCAGAAACACCC
GAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCCGCATACGCTT
CATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGCCTCCGCCGCG
TCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGACACCACCGAC
TTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGCATATCACGTC
ATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCCCCAACCGTAT
CGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGATAACCAGAGAG
GTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCCTGCTGTTCGG
CCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGACATCTCTTTG
TGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGACGGGGTGCCG
CTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAAAGTTGCGAGG
GGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGATAATGCGATTG
AGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGATTGTCTGGAGG
TATACGGAGAGT
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:578797..579858+

>ASPNIDRAFT_191841-T1 ID=ASPNIDRAFT_191841-T1|Name=ASPNIDRAFT_191841-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1944bp|location=Sequence derived from alignment at ACJE01000003.1:578797..579858+ (Aspergillus niger ATCC 1015)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGAAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCC
GCATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGC
CTCCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGA
CACCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGC
ATATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCC
CCAACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGAT
AACCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCC
TGCTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGA
CATCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGA
CGGGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAA
AGTTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGAT
AATGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGAT
TGTCTGGAGGTATACGGAGAGTATGGTAGTCCTCGCCGATATCCAATCCT
CCAATGCCCGGATTGCTACATCCCTTCCCCAGGGCATGGTAGCTGTCTTT
GTCGGAGCAACAAGTGGCATTGGCGAAGCAACCCTCAAGCAATTCGCTAA
GCATGCTACACGGCCCCGCGTCTATTTTGTCGGTCGCAAACAAGACGCGG
GTAACCGTATCGTCGCCGAATGTGAAGCCCTGAATCCAGAGGGGGAATAT
ATCTTCATCCCCGCAGACGTGAGCTTGCTCAGCAATGTCGACGAGGTCTG
TCGTAACATCAAGACCAAGGAAAGCACTCTCAATCTTCTGGTTCTCACGC
CGGGAATAGCGGCTATACATAGTGAAACACCCGAAGGACTTCGCAAGATC
ACCTCCCTCCTCTACTTCGCCCGCATACGCTTCATCCTAAACCTCCTCCC
TCTCCTCCAACAAGCCACCAGCCTCCGCCGCGTCATAACTGTCGGGGCAG
CCGGATCCGAAGGCCCCATCGACACCACCGACTTCGAAGGCAGAAAGGTG
TCAGCCCCCTTTTTTCGCGGGCATATCACGTCATTAACTACGGTGGCTCT
GGAGACCTTAGCTGAGAAAGCCCCAACCGTATCGTTCATCAATACTCACC
CCGGAGCTGTACAAACCGGGATAACCAGAGAGGTGGATAATCTCCGTATG
TGGATTGTCTGGCTTGCTCTCCTGCTGTTCGGCCGTTGGGTCTGTATCCC
TGTGATAGAGAGCGGAGAGAGACATCTCTTTGTGGCTACGAGTGCGAAGT
ATCCGGCGCGGGATGGGGACGACGGGGTGCCGCTGTCGGAGAGTGTCGTG
GTTGCGCGGGGTGTGGATGGAAAGTTGCGAGGGGGTGTTTATTGTGTTAC
CTCGGATGGGGAGAGCTCGGATAATGCGATTGAGGTTCTGAAAGGCTTGC
GAGAAATGGGCATTGGAGAGATTGTCTGGAGGTATACGGAGAGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191841ASPNIDRAFT_191841Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191841-T1.exon1ASPNIDRAFT_191841-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191841-T1.exon2ASPNIDRAFT_191841-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191841-T1.cdsASPNIDRAFT_191841-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191841-T1ASPNIDRAFT_191841-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:578797..579858 +
Powered by Drupal