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ASPNIDRAFT_192304-T1, ASPNIDRAFT_192304-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192304-T1
Unique NameASPNIDRAFT_192304-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:581482..582769+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192304-T1 ID=ASPNIDRAFT_192304-T1|Name=ASPNIDRAFT_192304-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1288bp|location=Sequence derived from alignment at ACJE01000003.1:581482..582769+ (Aspergillus niger ATCC 1015)
GGCGCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAA
CATGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATG
TTGTCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAA
GAAAGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCC
GCCCACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGC
CCCAGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTAT
CTGAGGGAGCCATTGGGCGAGTGGTTGGGGGTGAGTATTCACTTGGACTA
TCTATTCTAATACAGCCCAAACTAACACACAATCACCAGACAACCATCGC
CATCACTCTCGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCC
AAGCCGGCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATG
ATCGGCATCTACATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGC
CATCACAATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTG
TTATTTACATCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTC
GCCTACGCCATTTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAA
CCTCCCACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAA
AACAATTCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACC
GCTATTCTCGTCGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCC
CCCAGGAGCAGGAATGCAAGCATTCATCATCGGCATACTGATCACCGTAT
TAGTCCTTGCCCTAGGATATAACACAGGCGGGTACGTACCCCCTCTCTCC
CCCACCCCAGAAGCCCCGACGACTAATAATTACCAAGAGCATTCAACGGC
CCCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGG
ACACCTCTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCG
CCGACATCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTGGTG
TTCACTGGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAAGCG
CGCACTGCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGA
GGAGGAAGATCGGGGATATTGAGAGGGCAGTTGAGGAG
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Coding sequence (CDS) from alignment at ACJE01000003.1:581482..582769+

>ASPNIDRAFT_192304-T1 ID=ASPNIDRAFT_192304-T1|Name=ASPNIDRAFT_192304-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3504bp|location=Sequence derived from alignment at ACJE01000003.1:581482..582769+ (Aspergillus niger ATCC 1015)
GGCGCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAA
CATGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATG
TTGTCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAA
GAAAGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCC
GCCCACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGC
CCCAGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTAT
CTGAGGGAGCCATTGGGCGAGTGGTTGGGGACAACCATCGCCATCACTCT
CGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCGGCT
CATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATC
TACATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCACAAT
CTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACA
TCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCC
ATTTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCCACA
AAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAATTCG
TCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTC
GTCGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGC
AGGAATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCCTTG
CCCTAGGATATAACACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGC
CCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGA
GTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAG
GATTGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAA
AGCCCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAA
GGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGG
ATATTGAGAGGGCAGTTGGGCGCCTACATGCATCCGGAGTATCAGTCATT
TAATCCTCAATACGGAAACATGCAAGGGGACAAGCCTGTCTGGAGTCTAG
CGCAGCCGCTGCCCCATGTTGTCCGAGACGGAATGCGGTATGGAGCCTTG
CCGGAGGATCGAAAGGAAGAAAGAGACGAGGATGGACGAGAACGCCCGCC
TCCAGCGTCAGAAGAGCCGCCCACGGATATTCCGAAGACGGATGAAGCTA
GAGAGAATGGCGAAGAGCCCCAGAATGAGATGGGATTTTTCAATAAGTGG
TCCAAGATTCGATATTATCTGAGGGAGCCATTGGGCGAGTGGTTGGGGAC
AACCATCGCCATCACTCTCGGTCTCTGCGGCGGGTTGTCAACCTACACAT
CGGACGGCCAAGCCGGCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTC
AGCTTCATGATCGGCATCTACATTGTTGGTGGCATCTCCGGTGGCCACCT
CAATCCCGCCATCACAATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCC
GCCGATGTGTTATTTACATCCTCGCTCAGCTGATCGGCGCCATCACCGCC
GGCGGATTCGCCTACGCCATTTACCACGACGCCATCGTCAACCTCTCCGT
CGAGACCAACCTCCCACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAA
CTCTACCAAAACAATTCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTC
CTAGGCACCGCTATTCTCGTCGGAACCATCATGGCCTTGGGTGACGACAC
CAACGCCCCCCCAGGAGCAGGAATGCAAGCATTCATCATCGGCATACTGA
TCACCGTATTAGTCCTTGCCCTAGGATATAACACAGGCGGAGCATTCAAC
GGCCCCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGG
CGGACACCTCTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGG
TCGCCGACATCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTG
GTGTTCACTGGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAA
GCGCGCACTGCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTG
GGAGGAGGAAGATCGGGGATATTGAGAGGGCAGTTGGGCGCCTACATGCA
TCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACATGCAAGGGGACA
AGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTGTCCGAGACGGA
ATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAAAGAGACGAGGA
TGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCCCACGGATATTC
CGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCCAGAATGAGATG
GGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCTGAGGGAGCCATT
GGGCGAGTGGTTGGGGACAACCATCGCCATCACTCTCGGTCTCTGCGGCG
GGTTGTCAACCTACACATCGGACGGCCAAGCCGGCTCATGGATGACCCAG
AGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATCTACATTGTTGGTGG
CATCTCCGGTGGCCACCTCAATCCCGCCATCACAATCTCCATGTCCCTCT
GGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACATCCTCGCTCAGCTG
ATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCCATTTACCACGACGC
CATCGTCAACCTCTCCGTCGAGACCAACCTCCCACAAAGCGAAACAACAG
CTAGCCAAGCATTTCTAACTCTACCAAAACAATTCGTCAGTCCAGCTACT
GCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTCGTCGGAACCATCAT
GGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGCAGGAATGCAAGCAT
TCATCATCGGCATACTGATCACCGTATTAGTCCTTGCCCTAGGATATAAC
ACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGCCCCCGGCTCGTCGC
CGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGAGTACCATGCCTGGT
GGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAGGATTGTTCGGGGCG
TTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAAAGCCCGATCAATTA
CCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAAGGAGAAGAATCTGA
GAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGGATATTGAGAGGGCA
GTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192304ASPNIDRAFT_192304Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192304-T1.exon1ASPNIDRAFT_192304-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192304-T1.exon2ASPNIDRAFT_192304-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192304-T1.exon3ASPNIDRAFT_192304-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192304-T1.cdsASPNIDRAFT_192304-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192304-T1.utr3p1ASPNIDRAFT_192304-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192304-T1ASPNIDRAFT_192304-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022357
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:581482..582769 +
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