You are here

Home

ASPNIDRAFT_192330-T1, ASPNIDRAFT_192330-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192330-T1
Unique NameASPNIDRAFT_192330-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:849965..851728-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192330-T1 ID=ASPNIDRAFT_192330-T1|Name=ASPNIDRAFT_192330-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1764bp|location=Sequence derived from alignment at ACJE01000003.1:849965..851728- (Aspergillus niger ATCC 1015)
ATGGAAGACAACAAGGTCGCTTCCCAAGGGAAGCTGCCAATTGACAGTGC
CGTCACCGAGGAGAATGGCTCCCAATCCCCCTCCGATCGCTCCCTCACTC
CCTCCGGCCTGCGCGAGCGCCGGCGCAATGGCCTCACCAAGGATGTCGAA
AGCGACAATGAGGAGGAAGAAACTAAGCTGAAGCGCAACCTGAAGAACCG
TCACCTGCAGATGATCGCCATCGGTGAGTGAAAGACGCTTCAATCAGACA
TTTGATACTGCTATGAACTCGTCACTAACCCCCCCGAAGGTGGCACCATT
GGTACAGGTCTCTTCATCAGCAGTGGAACGGCCCTTGCGGAAGCTGGCCC
GGCGGGTTCCCTCATCGCATACGCCTTCGTTGGTTCTATCGTCTACTCGG
TCATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCATCCCCGGTGCC
TTCACCTCCTATGCCGCGCGTCTCGTCGACCCGAGTTTGGGTTTCGCCAT
GGGCTGGATCTACTGGTTCAACTGGGCCTCCACCTACGCCGTCGAATTGA
CCGCGTCCGGTATGATCATCCAGTACTGGAACGATCAGCTGTCCATTGCT
ATCTTCATCGGTGTCTTCTGGGTCGTCATCTCTGCCGTCAACTTCCTCCC
CGTCGGCTTCTACGGCGAGCTGGAGTTCTGGTTCTCTATCACGAAGGTCT
TGACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTGATGCTGGTGTA
GGCAAGCAGGGCTACATTGGCTTCAAGTACTGGCATGACCCGGGTGCTTT
TGCTCCCTACCTGATCACCTCCAATGAATCCGTTGGCAAGTTCGTCGGCT
TCTGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGGGTACCGAGCTG
GTCGGTGTCGCCGCTGGTGAGACTGAGAACCCCCAGAAGACTGTCCCCTC
GGCTATTCGCAAGACTTTCATCCGTATCCTGGTCTTCTTTGTCCTGACTA
TCTTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCGACCTGGCCAGC
GGAGCTGAGAACGCCTCCGCCTCTCCCATGGTCATTGCGGCCAACTTGGC
CGGTGTCAAGGTTCTTCCTAGCTTGATCAACGCTGTTCTTCTCACTGTCG
TCTTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTCGTGTCCTGCTT
GGCCTGGCCCAGGAGGGTTTCGCGCCCTCAGTCTTCGGATGGGTCACTCG
CCGTGGTGTCCCCTACGTCAGTGTGGCTTTCACCGCTCTCTTCGGACTGC
TGGGATTCATGAACGTCTCGGAATCAGGTACCACCGTCTTCAACTGGCTG
GTCAACATCTCCAGTGTGGCTGGATTCATTTGCTGGACTTCCATCAACGC
CAGTCATATTGCCTTCATGAAGGCAATGAAAGCGCGCGGTCTCTCTCGTG
ACACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGGCCTGGTACGGT
CTGTTCTTCAACATCCTGATCATCTTCACTCAGGGTTTCACCGCTTGGAT
CCCGACTTTCAATGTGTCGGACTTTTGGGTAGCCTACATCTGCCCCGTTT
TGTTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACCGCACGCGCTTT
GTGCGCCCCATCGAGGCGGATCTGGACACCGGACGTCCGCCGTACACTAC
CTGGGAATCGAGCAATCCCAAGGAGGGATGGGTGCGCAGGATCTGGGATA
GCATCATGGGATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:849965..851728-

>ASPNIDRAFT_192330-T1 ID=ASPNIDRAFT_192330-T1|Name=ASPNIDRAFT_192330-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3396bp|location=Sequence derived from alignment at ACJE01000003.1:849965..851728- (Aspergillus niger ATCC 1015)
GTGGCACCATTGGTACAGGTCTCTTCATCAGCAGTGGAACGGCCCTTGCG
GAAGCTGGCCCGGCGGGTTCCCTCATCGCATACGCCTTCGTTGGTTCTAT
CGTCTACTCGGTCATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCA
TCCCCGGTGCCTTCACCTCCTATGCCGCGCGTCTCGTCGACCCGAGTTTG
GGTTTCGCCATGGGCTGGATCTACTGGTTCAACTGGGCCTCCACCTACGC
CGTCGAATTGACCGCGTCCGGTATGATCATCCAGTACTGGAACGATCAGC
TGTCCATTGCTATCTTCATCGGTGTCTTCTGGGTCGTCATCTCTGCCGTC
AACTTCCTCCCCGTCGGCTTCTACGGCGAGCTGGAGTTCTGGTTCTCTAT
CACGAAGGTCTTGACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTG
ATGCTGGTGTAGGCAAGCAGGGCTACATTGGCTTCAAGTACTGGCATGAC
CCGGGTGCTTTTGCTCCCTACCTGATCACCTCCAATGAATCCGTTGGCAA
GTTCGTCGGCTTCTGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGG
GTACCGAGCTGGTCGGTGTCGCCGCTGGTGAGACTGAGAACCCCCAGAAG
ACTGTCCCCTCGGCTATTCGCAAGACTTTCATCCGTATCCTGGTCTTCTT
TGTCCTGACTATCTTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCG
ACCTGGCCAGCGGAGCTGAGAACGCCTCCGCCTCTCCCATGGTCATTGCG
GCCAACTTGGCCGGTGTCAAGGTTCTTCCTAGCTTGATCAACGCTGTTCT
TCTCACTGTCGTCTTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTC
GTGTCCTGCTTGGCCTGGCCCAGGAGGGTTTCGCGCCCTCAGTCTTCGGA
TGGGTCACTCGCCGTGGTGTCCCCTACGTCAGTGTGGCTTTCACCGCTCT
CTTCGGACTGCTGGGATTCATGAACGTCTCGGAATCAGGTACCACCGTCT
TCAACTGGCTGGTCAACATCTCCAGTGTGGCTGGATTCATTTGCTGGACT
TCCATCAACGCCAGTCATATTGCCTTCATGAAGGCAATGAAAGCGCGCGG
TCTCTCTCGTGACACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGG
CCTGGTACGGTCTGTTCTTCAACATCCTGATCATCTTCACTCAGGGTTTC
ACCGCTTGGATCCCGACTTTCAATGTGTCGGACTTTTGGGTAGCCTACAT
CTGCCCCGTTTTGTTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACC
GCACGCGCTTTGTGCGCCCCATCGAGGCGGATCTGGACACCGGACGTCCG
CCGTACACTACCTGGGAATCGAGCAATCCCAAGGAGGGATGGGTGCGCAG
GATCTGGGATAGCATCATGGGATAGATGGAAGACAACAAGGTCGCTTCCC
AAGGGAAGCTGCCAATTGACAGTGCCGTCACCGAGGAGAATGGCTCCCAA
TCCCCCTCCGATCGCTCCCTCACTCCCTCCGGCCTGCGCGAGCGCCGGCG
CAATGGCCTCACCAAGGATGTCGAAAGCGACAATGAGGAGGAAGAAACTA
AGCTGAAGCGCAACCTGAAGAACCGTCACCTGCAGATGATCGCCATCGGT
GGCACCATTGGTACAGGTCTCTTCATCAGCAGTGGAACGGCCCTTGCGGA
AGCTGGCCCGGCGGGTTCCCTCATCGCATACGCCTTCGTTGGTTCTATCG
TCTACTCGGTCATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCATC
CCCGGTGCCTTCACCTCCTATGCCGCGCGTCTCGTCGACCCGAGTTTGGG
TTTCGCCATGGGCTGGATCTACTGGTTCAACTGGGCCTCCACCTACGCCG
TCGAATTGACCGCGTCCGGTATGATCATCCAGTACTGGAACGATCAGCTG
TCCATTGCTATCTTCATCGGTGTCTTCTGGGTCGTCATCTCTGCCGTCAA
CTTCCTCCCCGTCGGCTTCTACGGCGAGCTGGAGTTCTGGTTCTCTATCA
CGAAGGTCTTGACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTGAT
GCTGGTGTAGGCAAGCAGGGCTACATTGGCTTCAAGTACTGGCATGACCC
GGGTGCTTTTGCTCCCTACCTGATCACCTCCAATGAATCCGTTGGCAAGT
TCGTCGGCTTCTGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGGGT
ACCGAGCTGGTCGGTGTCGCCGCTGGTGAGACTGAGAACCCCCAGAAGAC
TGTCCCCTCGGCTATTCGCAAGACTTTCATCCGTATCCTGGTCTTCTTTG
TCCTGACTATCTTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCGAC
CTGGCCAGCGGAGCTGAGAACGCCTCCGCCTCTCCCATGGTCATTGCGGC
CAACTTGGCCGGTGTCAAGGTTCTTCCTAGCTTGATCAACGCTGTTCTTC
TCACTGTCGTCTTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTCGT
GTCCTGCTTGGCCTGGCCCAGGAGGGTTTCGCGCCCTCAGTCTTCGGATG
GGTCACTCGCCGTGGTGTCCCCTACGTCAGTGTGGCTTTCACCGCTCTCT
TCGGACTGCTGGGATTCATGAACGTCTCGGAATCAGGTACCACCGTCTTC
AACTGGCTGGTCAACATCTCCAGTGTGGCTGGATTCATTTGCTGGACTTC
CATCAACGCCAGTCATATTGCCTTCATGAAGGCAATGAAAGCGCGCGGTC
TCTCTCGTGACACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGGCC
TGGTACGGTCTGTTCTTCAACATCCTGATCATCTTCACTCAGGGTTTCAC
CGCTTGGATCCCGACTTTCAATGTGTCGGACTTTTGGGTAGCCTACATCT
GCCCCGTTTTGTTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACCGC
ACGCGCTTTGTGCGCCCCATCGAGGCGGATCTGGACACCGGACGTCCGCC
GTACACTACCTGGGAATCGAGCAATCCCAAGGAGGGATGGGTGCGCAGGA
TCTGGGATAGCATCATGGGATAGATGGAAGACAACAAGGTCGCTTCCCAA
GGGAAGCTGCCAATTGACAGTGCCGTCACCGAGGAGAATGGCTCCCAATC
CCCCTCCGATCGCTCCCTCACTCCCTCCGGCCTGCGCGAGCGCCGGCGCA
ATGGCCTCACCAAGGATGTCGAAAGCGACAATGAGGAGGAAGAAACTAAG
CTGAAGCGCAACCTGAAGAACCGTCACCTGCAGATGATCGCCATCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192330ASPNIDRAFT_192330Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192330-T1ASPNIDRAFT_192330-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192330-T1.cdsASPNIDRAFT_192330-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192330-T1.exon2ASPNIDRAFT_192330-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192330-T1.exon1ASPNIDRAFT_192330-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR004840
DBxrefInterPro:IPR004841
DBxrefInterPro:IPR004762
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:849965..851728 -
Powered by Drupal