|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000012.1:783466..784013+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_192646-T1 ID=ASPNIDRAFT_192646-T1|Name=ASPNIDRAFT_192646-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=548bp|location=Sequence derived from alignment at ACJE01000012.1:783466..784013+ (Aspergillus niger ATCC 1015)
ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGGTACCTCCCTCGC
ATCCATCTCTCCCTAGCCATTTCAATTGACGTTGCTAACCACGTCTCTCC
CTTTCTTCTAGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAA
CCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCT
CCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGA
TGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCA
AGCTAGGAGGCGAGGACGACAAGTAAGGACTCCACCCTACAGCGACGAGG
CAACTCAACTGGGAGGACAGTCATTGACCGCTCCGCCACGTTTATAGCTT
CGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGA
CCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGC
GTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACG back to topCoding sequence (CDS) from alignment at ACJE01000012.1:783466..784013+ >ASPNIDRAFT_192646-T1 ID=ASPNIDRAFT_192646-T1|Name=ASPNIDRAFT_192646-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1197bp|location=Sequence derived from alignment at ACJE01000012.1:783466..784013+ (Aspergillus niger ATCC 1015)
ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTA
TAATCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCAT
CACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGC
CAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGT
TTTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAACT
TCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCG
ACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCG
CGTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACGA
TGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTAT
AATCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCATC
ACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCC
AAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTT
TTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAACTT
CGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGA
CCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGC
GTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACGAT
GGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTATA
ATCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCA
CGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCA
AACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTT
TCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAACTTC
GTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGAC
CAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCG
TTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030008 | TRAPP complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR007233 |
| DBxref | PFAM:PF04099 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000012.1 | supercontig | ACJE01000012.1:783466..784013 + |
|
