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ASPNIDRAFT_194814-T1, ASPNIDRAFT_194814-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_194814-T1
Unique NameASPNIDRAFT_194814-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000017.1:280423..281062+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_194814-T1 ID=ASPNIDRAFT_194814-T1|Name=ASPNIDRAFT_194814-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=640bp|location=Sequence derived from alignment at ACJE01000017.1:280423..281062+ (Aspergillus niger ATCC 1015)
ATGAAATACCTCGGGGACATCAAAGTCGGCCTCGACGAAGTGGCATGCCT
AGGGATTGCCGAGCTACTCAAATCCCCCTCAATGGGCGAATTCACCCGCG
AAGGCTTTATCAACGGCTGGAGAATAACTGGGTAAATACCCTACTTCCTC
TCGCCATCCCACCCCCACCTACATACAATACAAGCTAATATATGGATATA
GATCCGACTCCCTCGACAAAATGATCGCCCACGCCGCCGACATGCGCGCG
CGCATCCCCATCCAACCGGACCTCTTCCGTCGCGTCTACCGCTTCACCTT
CCCCCTATGCCGCATGCAAGGCCAGCGGAATCTGCAGTTCGAGATCGCGG
CGGAGCAATGGCGCCTGTTCTTCACGCCGCAGAATGGCGGGGTGCAGTGG
AACACGAGCAAGACTCCGTGGTTGGATTGGTGGATTGAGTTCCTGGAGGA
GAGGGGGAAGAGGCCCGTGAATAAGGATCTGTGGGAGCAGGTGGAGGTGT
TTATGCGGAAGACGCTGGAGGATGAGAACTTTGGGTGGTGGAGTGCGGAT
GGGGCATGGCCCGGGGCGTTGGATGATTTTGTGGAGTGGGTGCAGAAGAA
GAGGGGGAAGGAAGCGGGGGAAGATATGGAGGTTGAGTAG
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Coding sequence (CDS) from alignment at ACJE01000017.1:280423..281062+

>ASPNIDRAFT_194814-T1 ID=ASPNIDRAFT_194814-T1|Name=ASPNIDRAFT_194814-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1140bp|location=Sequence derived from alignment at ACJE01000017.1:280423..281062+ (Aspergillus niger ATCC 1015)
ATGAAATACCTCGGGGACATCAAAGTCGGCCTCGACGAAGTGGCATGCCT
AGGGATTGCCGAGCTACTCAAATCCCCCTCAATGGGCGAATTCACCCGCG
AAGGCTTTATCAACGGCTGGAGAATAACTGGATCCGACTCCCTCGACAAA
ATGATCGCCCACGCCGCCGACATGCGCGCGCGCATCCCCATCCAACCGGA
CCTCTTCCGTCGCGTCTACCGCTTCACCTTCCCCCTATGCCGCATGCAAG
GCCAGCGGAATCTGCAGTTCGAGATCGCGGCGGAGCAATGGCGCCTGTTC
TTCACGCCGCAGAATGGCGGGGTGCAGTGGAACACGAGCAAGACTCCGTG
GTTGGATTGGTGGATTGAGTTCCTGGAGGAGAGGGGGAAGAGGCCCGTGA
ATAAGGATCTGTGGGAGCAGGTGGAGGTGTTTATGCGGAAGACGCTGGAG
GATGAGAACTTTGGGTGGTGGAGTGCGGATGGGGCATGGCCCGGGGCGTT
GGATGATTTTGTGGAGTGGGTGCAGAAGAAGAGGGGGAAGGAAGCGGGGG
AAGATATGGAGGTTGAGTAGATGAAATACCTCGGGGACATCAAAGTCGGC
CTCGACGAAGTGGCATGCCTAGGGATTGCCGAGCTACTCAAATCCCCCTC
AATGGGCGAATTCACCCGCGAAGGCTTTATCAACGGCTGGAGAATAACTG
GATCCGACTCCCTCGACAAAATGATCGCCCACGCCGCCGACATGCGCGCG
CGCATCCCCATCCAACCGGACCTCTTCCGTCGCGTCTACCGCTTCACCTT
CCCCCTATGCCGCATGCAAGGCCAGCGGAATCTGCAGTTCGAGATCGCGG
CGGAGCAATGGCGCCTGTTCTTCACGCCGCAGAATGGCGGGGTGCAGTGG
AACACGAGCAAGACTCCGTGGTTGGATTGGTGGATTGAGTTCCTGGAGGA
GAGGGGGAAGAGGCCCGTGAATAAGGATCTGTGGGAGCAGGTGGAGGTGT
TTATGCGGAAGACGCTGGAGGATGAGAACTTTGGGTGGTGGAGTGCGGAT
GGGGCATGGCCCGGGGCGTTGGATGATTTTGTGGAGTGGGTGCAGAAGAA
GAGGGGGAAGGAAGCGGGGGAAGATATGGAGGTTGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DCN1ASPNIDRAFT_194814Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_194814-T1.exon1ASPNIDRAFT_194814-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_194814-T1.exon2ASPNIDRAFT_194814-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_194814-T1.cdsASPNIDRAFT_194814-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_194814-T1ASPNIDRAFT_194814-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005176
DBxrefPFAM:PF03556
ProductScaffold-type E3 ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000017.1supercontigACJE01000017.1:280423..281062 +
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