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ASPNIDRAFT_196672-T1, ASPNIDRAFT_196672-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196672-T1
Unique NameASPNIDRAFT_196672-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1045643..1046490+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196672-T1 ID=ASPNIDRAFT_196672-T1|Name=ASPNIDRAFT_196672-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=848bp|location=Sequence derived from alignment at ACJE01000004.1:1045643..1046490+ (Aspergillus niger ATCC 1015)
ATAGCGCTTGATCGTTGTTTTGAATCCTTGCTCATTCAACCTATTACTAC
ATTCCTCATCGACGTCCAGCAAAATGGCTAGCGAAAAGAAAGATAAGCTT
GAGGGTAAGTCCCCGGACGCGGCATTGTCAAATGATGGCTAACATGACCG
TTCAGCGCAGATCAAGTCCGTCGATATGGTAAGAGGAATTGCTGGAGGTA
ACCAAGAATTGTGCTTACAACATGGCAGACGGAGGATATGCAGCAGGAGG
CTGTTGAAGTTGGTATGGTCAGCCCTACGGGTCACCTCGAAAAGGAGGGC
TAATACAACGGCTAGCAATTGAGGCAATGGACAAGTACCACATTGAGAAG
GTAGGTTCGGTGTCATCTGTTGGTTGACTATGCTAACGACAGCAGGATAT
CGCCCAATACATCAAGCGAGAGGTCAGCATTGCGCACTGTATCCGGACCA
CCCCTCATTGCTCACAATCTACAGTTCGATTCGCGCAAGGGTGCGACATG
GCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGGTGAGT
GTCATGGCCAGGGCATCAGGGGTACGGGCTAACTTTCGAGCAGAGACGAA
ACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGA
CCCAATGAACATACGACCGCAGACACCGGTCTGATTCGCCAAAGCGATGT
CTATAACCCTTTCGGATAATTCAAGCAGAAGTATCGTGCAGTGAAAGGTC
CCATGCAAGAGCTGGAAGGAAATGCAGCCATATGGTCCAAAACGGAATGC
TGTGGGGTTGCCTAGAGGGCACAACGAGGCGGTGATTCTTCCGCGCAT
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Coding sequence (CDS) from alignment at ACJE01000004.1:1045643..1046490+

>ASPNIDRAFT_196672-T1 ID=ASPNIDRAFT_196672-T1|Name=ASPNIDRAFT_196672-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1995bp|location=Sequence derived from alignment at ACJE01000004.1:1045643..1046490+ (Aspergillus niger ATCC 1015)
ATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGA
TATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAA
TGGACAAGTACCACATTGAGAAGGATATCGCCCAATACATCAAGCGAGAG
TTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTT
TGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTACTTCTACCTCG
GGCACTGCGCCATCCTCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAG
AAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGATATGACGGAGGATAT
GCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTACCACA
TTGAGAAGGATATCGCCCAATACATCAAGCGAGAGTTCGATTCGCGCAAG
GGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCAC
GCATGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCC
TCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAG
GCGCAGATCAAGTCCGTCGATATGACGGAGGATATGCAGCAGGAGGCTGT
TGAAGTTGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGGATATCG
CCCAATACATCAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACATGGCAC
TGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGAGACGAAACA
CTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCC
AATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCC
GTCGATATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGA
GGCAATGGACAAGTACCACATTGAGAAGGATATCGCCCAATACATCAAGC
GAGAGTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGG
AACTTTGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTACTTCTA
CCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGAATGGCTAGCG
AAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGATATGACGGAG
GATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTA
CCACATTGAGAAGGATATCGCCCAATACATCAAGCGAGAGTTCGATTCGC
GCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTC
GTCACGCATGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGC
CATCCTCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAGAAAGATAAGC
TTGAGGCGCAGATCAAGTCCGTCGATATGACGGAGGATATGCAGCAGGAG
GCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGGA
TATCGCCCAATACATCAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACAT
GGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGAGACG
AAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAA
GACCCAATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCA
AGTCCGTCGATATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCA
ATTGAGGCAATGGACAAGTACCACATTGAGAAGGATATCGCCCAATACAT
CAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCG
GAAGGAACTTTGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTAC
TTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
GO:0030286dynein complex
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672ASPNIDRAFT_196672Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672-T1ASPNIDRAFT_196672-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672-T1.utr5p1ASPNIDRAFT_196672-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672-T1.exon1ASPNIDRAFT_196672-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon2ASPNIDRAFT_196672-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon3ASPNIDRAFT_196672-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon4ASPNIDRAFT_196672-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon5ASPNIDRAFT_196672-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon6ASPNIDRAFT_196672-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196672-T1.exon7ASPNIDRAFT_196672-T1.exon7Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672-T1.cdsASPNIDRAFT_196672-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196672-T1.utr3p1ASPNIDRAFT_196672-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019763
DBxrefInterPro:IPR037177
DBxrefInterPro:IPR001372
DBxrefPFAM:PF01221
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1045643..1046490 +
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