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ASPNIDRAFT_196788-T1, ASPNIDRAFT_196788-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196788-T1
Unique NameASPNIDRAFT_196788-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:758045..760353+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196788-T1 ID=ASPNIDRAFT_196788-T1|Name=ASPNIDRAFT_196788-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2309bp|location=Sequence derived from alignment at ACJE01000004.1:758045..760353+ (Aspergillus niger ATCC 1015)
TCAACGCTCATCAATCGCGATTCCATTAGATCCAGCATCATCATCAGTTT
CATCCATCGAGTCCTCTCCGTTGGAGAAACACCATTTATATCTAGATCTC
CGTTCGATCTCATTGGTGTCGGGGGACTTTCTCGCAACAACCAGTGATCG
TTGCTCGCCTTGCCAGGGACTTCTGGTTCGCCAATTGATTGCTGCGCGCA
TCGCGGCCGTCCCCAGTAATACCTGCCCTACAACCATTTGCCTGCTCTCT
ACTGGACGGTAAGCCAATAACTCAACACGCCCCATCCATCCCCAGCGTCG
TGGGCCACCGGAATTTGATCCAATCGCCTGGTCGGTCGCTCCCTCTTTAA
TTGTTGGTTTTGCTGCTTTTCCCAGCTGCGCAACGTGCCACACTGCCAGT
CTGACCCACGGTTACTTCCGTGTTGCATTACCCGCGTCACATCCCGCCCC
GACTGTTCCCAGATCTTCCGCGCTGGAAACTGTCAAGTGCGCATGGCTTG
CTGACGTGACCACTCCTGCAGTCGCGCGCGCGCCCCCTCTAAACTCCCTC
CACACAGAGCCACAGGGGCTTGCCCAAAAAAGAGTTTCCAGGTTTCTGGG
TGCTGTATCCTCTTCACTGGCTAATCAAATCAGATCCTTCCATTTAGAAG
AAGAAAGAAAATAAAACAAAAAAGAGAAAAAAGACATACGAAAAAGAAAC
GCGCAGGAAATCTCAAGAACAGACAGGCAAGACAGATTTAAAGTACTTTA
GAAACAATAACAAACAGAAACGCCTGCTGCGACCACAACCCCCCCTCCAC
CCTCCTCGTCGAATAATAGATCCCGCCGGTCCTTGCTCACGACGCTAAAG
CAGGACTATCGCAGAAGCATTGCCAATCCCCCACACGCGCAACTACGCCC
GTCTTTCCCCGTTCAGGCTGTCGTGAAGCGAATCGCTGCCCAGCCAGACG
CACCCTCGTTGTCCTTGGCGCGGCTGTATCATAGCGCGCGAGATCGAGAA
TCCACCGCGTGCTGCACGCAGCTCTGACGTGGTTTGCCAACAGAGCAGTT
AGAGACAAGCCCCCGTTCTAAATCCAGTATCTCTGCACGTTCTCAGAACA
GCTAAAAATCATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAAC
CCGAAGTTCAATCGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAA
GACACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAG
ATGGCTACCAATTGCAAATGGTTAGTTACGTTCCCTTGCAGCTTTCTCTT
TTTCTGATTTGCGCGTACCTTACGTTTATCTGCTGGTCAACCGCCTCTTG
CCCTACTATGGTGGTTCACCCACCCCCCCCTTCAACCACCCCCTAGTTGC
TTTATCTGATCATATCCGCCGGCTCTTCTGTATAATTTTTTGTGACTTGG
ATTTTCATGGCTCGGATACAGCCTACCTTGGCCCTTTCATCGTTCGTCTT
CTGGTTGCTCGCACATTACCCATCATAGAAGCTCGCATACTCCCCCCCAA
TGTCTGGAAGTAAAAGACGCCTGATCACTTTCATCTATGCTTGCGACTCC
CGCATTTATCACAGTTGATACCAAATTAGGATACTAATGTTGCAAATCAA
GTGGCCCGCATCATGAAGCTGGCTTTGCCTGAAAATGCCAAAATCGCAAA
GGAGGCCAAGGAGTGTATGCAAGAGTGTGTGAGCGAGTTTATCTCATTCA
TCACTAGCGAAGGTTGGTGCGACCACACCTGCTCTACAAGCTCTTTCACT
GACGGAGTCTCGCACATTTGTCCGTAGCCTCCGAGAAATGCCAGCAAGAA
AAGCGCAAGACCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCCT
CGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTATC
GCGAGGTGAGACCTGTGCAACGTCCCTAATCATGTTGCCTCTTTTTCGTA
ACAGGCGACATTGAGTTTCATGACGTATCCGGACGCTAATGATTCCTCTA
GACCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAACAAGCAGTGGAT
ATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCCGGTCCTGGTGGC
CGTCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGCTGACAGCGCCAA
CAATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGGACACTTCCGCTT
ATGGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGCACCGCTGGTGAA
TCTTATTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:758045..760353+

>ASPNIDRAFT_196788-T1 ID=ASPNIDRAFT_196788-T1|Name=ASPNIDRAFT_196788-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2628bp|location=Sequence derived from alignment at ACJE01000004.1:758045..760353+ (Aspergillus niger ATCC 1015)
ATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAACCCGAAGTTCA
ATCGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAAGACACTCAGG
CGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAGATGGCTACCA
ATTGCAAATGTGGCCCGCATCATGAAGCTGGCTTTGCCTGAAAATGCCAA
AATCGCAAAGGAGGCCAAGGAGTGTATGCAAGAGTGTGTGAGCGAGTTTA
TCTCATTCATCACTAGCGAAGCCTCCGAGAAATGCCAGCAAGAAAAGCGC
AAGACCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCCTCGGCTT
TGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTATCGCGAGA
CCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAACAAGCAGTGGATAT
GGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCCGGTCCTGGTGGCCG
TCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGCTGACAGCGCCAACA
ATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGGACACTTCCGCTTAT
GGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGCACCGCTGGTGAATC
TTATTAGATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAACCCG
AAGTTCAATCGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAAGAC
ACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAGATG
GCTACCAATTGCAAATGTGGCCCGCATCATGAAGCTGGCTTTGCCTGAAA
ATGCCAAAATCGCAAAGGAGGCCAAGGAGTGTATGCAAGAGTGTGTGAGC
GAGTTTATCTCATTCATCACTAGCGAAGCCTCCGAGAAATGCCAGCAAGA
AAAGCGCAAGACCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCC
TCGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTAT
CGCGAGACCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAACAAGCAG
TGGATATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCCGGTCCTG
GTGGCCGTCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGCTGACAGC
GCCAACAATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGGACACTTC
CGCTTATGGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGCACCGCTG
GTGAATCTTATTAGATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTG
GAACCCGAAGTTCAATCGGGTGAAGACCAGGAACAAATGGATAAGGAACA
ACAAGACACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGG
ATAGATGGCTACCAATTGCAAATGTGGCCCGCATCATGAAGCTGGCTTTG
CCTGAAAATGCCAAAATCGCAAAGGAGGCCAAGGAGTGTATGCAAGAGTG
TGTGAGCGAGTTTATCTCATTCATCACTAGCGAAGCCTCCGAGAAATGCC
AGCAAGAAAAGCGCAAGACCGTTAACGGGGAGGACATTCTATTCGCCATG
ACCTCCCTCGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTC
CAAGTATCGCGAGACCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAA
CAAGCAGTGGATATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCC
GGTCCTGGTGGCCGTCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGC
TGACAGCGCCAACAATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGG
ACACTTCCGCTTATGGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGC
ACCGCTGGTGAATCTTATTAGATGTCGTCGACCTCTCCCTCGAAGGAACC
GGAGGTGGAACCCGAAGTTCAATCGGGTGAAGACCAGGAACAAATGGATA
AGGAACAACAAGACACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAG
GAGCAGGATAGATGGCTACCAATTGCAAATGTGGCCCGCATCATGAAGCT
GGCTTTGCCTGAAAATGCCAAAATCGCAAAGGAGGCCAAGGAGTGTATGC
AAGAGTGTGTGAGCGAGTTTATCTCATTCATCACTAGCGAAGCCTCCGAG
AAATGCCAGCAAGAAAAGCGCAAGACCGTTAACGGGGAGGACATTCTATT
CGCCATGACCTCCCTCGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTT
ACCTGTCCAAGTATCGCGAGACCCAATCCGCCAGAGGCGAGCACCAGAAC
CGTCCAACAAGCAGTGGATATGGTGCTGGCGCGCCCGTAGGGGCCCCGGG
ACCTGCCGGTCCTGGTGGCCGTCCAATGGCACCAGGTGCAGGGTTTCCTG
ATGCTGCTGACAGCGCCAACAATATCATGAACCAAAGCTTGGACCCGTCT
GAGCAGGACACTTCCGCTTATGGCTACCCCCCGATGGTCGGCCAGCCGCA
CAACGGCACCGCTGGTGAATCTTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196788ASPNIDRAFT_196788Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196788-T1ASPNIDRAFT_196788-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196788-T1.utr5p1ASPNIDRAFT_196788-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_196788-T1.utr5p2ASPNIDRAFT_196788-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196788-T1.exon1ASPNIDRAFT_196788-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196788-T1.exon2ASPNIDRAFT_196788-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196788-T1.exon3ASPNIDRAFT_196788-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196788-T1.exon4ASPNIDRAFT_196788-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196788-T1.exon5ASPNIDRAFT_196788-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196788-T1.cdsASPNIDRAFT_196788-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR003956
DBxrefInterPro:IPR003958
DBxrefInterPro:IPR009072
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
ProductCCAAT-binding factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:758045..760353 +
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