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ASPNIDRAFT_197098-T1, ASPNIDRAFT_197098-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197098-T1
Unique NameASPNIDRAFT_197098-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:734779..735733+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197098-T1 ID=ASPNIDRAFT_197098-T1|Name=ASPNIDRAFT_197098-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=955bp|location=Sequence derived from alignment at ACJE01000010.1:734779..735733+ (Aspergillus niger ATCC 1015)
CGCATTCCTGATCCATTGCTTTCTGTCCGTGCTCGGTGCTGTCTTTGTGC
CCTATGCGCTGAGTCTGCTGGGTGCCTTCTTGTCCGCTTTTTCGTATCTT
CTCTTTTCACTCTCCTCTCTTCTTCTTGCTACGCGATTGATAGCCACATC
CACATTTCCACCATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGC
CGTGACGGCGCAAACCTCGAAGCTGGCTAGGGTACGTATCTGTACTTCCT
TTTGGACCCTTTTTCACAGTGTCTGTCGCAATCCTGCAACCAGCGCAGAC
GACGTGCCCATCCGCTACCCCAGCAGACAACACCAACCCACGGACCATGA
CATGACATGATAAGCTAACTAATACCTCGCACAGCAATACCAAACCTACC
TCGACGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTC
CTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACAT
CGTGGCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCC
TGCAACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGAC
GGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCG
TCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTC
GCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATC
CCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTT
GACCAGTACGTATACCAGTTCTGCTTATCTGTGGTGGGAGGCGAAACCGG
CAGAAGGCTAACCCAAATTCACTACTAGTGCGCCGCCAGATCCAGCACAT
GATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCC
GGTCA
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Coding sequence (CDS) from alignment at ACJE01000010.1:734779..735733+

>ASPNIDRAFT_197098-T1 ID=ASPNIDRAFT_197098-T1|Name=ASPNIDRAFT_197098-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1698bp|location=Sequence derived from alignment at ACJE01000010.1:734779..735733+ (Aspergillus niger ATCC 1015)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCC
CATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTC
TTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCT
CGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCG
ACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCT
CCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCG
TCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCG
GCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCT
GTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCA
GATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGA
CGCGGTACGGCCGGTCATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCA
CGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAGGCAATACCAAACCTAC
CTCGACGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGT
CCTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACA
TCGTGGCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTC
CTGCAACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGA
CGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCC
GTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACT
CGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATAT
CCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGT
TGACCATGCGCCGCCAGATCCAGCACATGATCAAGTACCGCTACGTGCCG
TTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATGGACGTTCCTGAGCCT
GAGCAGACGCCTTTCACGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAG
GCAATACCAAACCTACCTCGACGCCTCCACCCCATTCACAGCCTACCGCT
GGACCGGCACCGTCGTCCTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTC
GCCCAGGGATGGTACATCGTGGCCTACACCCTCGGCATCTACCTGCTCAA
CCTCTTCCTCCTCTTCCTGCAACCCAAGTTCGACCCCTCCCTGACGCAGG
ATGAGGGTCTGGAAGACGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAG
CAAGACGACGAATTCCGTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTT
CTGGCACTCGGCCACTCGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGT
TCGCCGTCTTCGATATCCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGG
ATTATTCTCTTTGTGTTGACCATGCGCCGCCAGATCCAGCACATGATCAA
GTACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RER1ASPNIDRAFT_197098Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197098-T1.utr5p1ASPNIDRAFT_197098-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197098-T1.exon1ASPNIDRAFT_197098-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197098-T1.exon2ASPNIDRAFT_197098-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197098-T1.exon3ASPNIDRAFT_197098-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197098-T1.cdsASPNIDRAFT_197098-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197098-T1ASPNIDRAFT_197098-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265ANI
DBxrefInterPro:IPR004932
DBxrefPFAM:PF03248
Productretention in endoplasmic reticulum protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:734779..735733 +
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