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ASPNIDRAFT_197459-T1, ASPNIDRAFT_197459-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197459-T1
Unique NameASPNIDRAFT_197459-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1800339..1802003-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197459-T1 ID=ASPNIDRAFT_197459-T1|Name=ASPNIDRAFT_197459-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1665bp|location=Sequence derived from alignment at ACJE01000010.1:1800339..1802003- (Aspergillus niger ATCC 1015)
CCGCTCCCCGCTGCTACTGCTGCTATTCTTCCCACCATGGCAGCCAACGT
TCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGCCGCCCACCCGCCCA
AGACCGCTGAAGAGATCGCCAACCAGTATGACCTGCTGCCCAAGCTGATC
CCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGG
CTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAAGTACGAGCTGTTGA
AGCACACCAACATGACCGACTATGTGGCCAACCTGTGGAAGGAAATTAAC
GACTCCGACACCATCCCCGACGAGTTCGTCAAGAAGAGAGAGGAGGTCCT
CGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAAGATCACCGAGCTGC
TGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCGACAAGGTCGCCAAC
TTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCCGATATGGTCAACAG
CCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGGTAGTTACGGCAATG
CCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCACCGACAACGACAAG
GTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAGATTCTGACCACCAG
CTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAAGGACTCGATCGAGA
CCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGAACCGCTCCTGGTTG
ATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGACCCTGCTCGCGATGT
CCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAACACCATCCAGACTA
GCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCGTCATCACCAACCGC
AACCGTGCCCACAAGAACAGCAACGTCTACCAGAAGCAGTTGAAGGACCT
GATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTCCGACCCCATCACCG
ACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTGAGGAGGCCCAGAAG
AAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGACTTCTTCCTCGTTTC
GGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCTGATCTCCGAGAGCT
ACTGCAAGATCCACCAGCGGATCGACATCAAGTATGTCAATCAACACGAA
GAACATTCATTCACGCATTATCTTGCTAACCGATCACACCAGGGACCTGT
CTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTCAAC
CTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGGCAC
TGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTGAGA
AGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGGTTCGTCCAATAC
CCTATCCTATCAATCCATCTCCATCCTTTGTTACTAACGCCAAAATGATC
CAGTGCTGCCGTTGCGAAATAAATGACACCCCCCACTTCTTGAAACTTAT
ACCGAAACAAGAAATCTTCGTCCTTTTACCGTTCTCTTCATGGTTCTGTT
ATGTTAGTAGTATCTTCCGCCGCAGTGCGGACTTCCTGAAATGATGGGAC
CAAGCAGAGTGGCAT
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Coding sequence (CDS) from alignment at ACJE01000010.1:1800339..1802003-

>ASPNIDRAFT_197459-T1 ID=ASPNIDRAFT_197459-T1|Name=ASPNIDRAFT_197459-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4077bp|location=Sequence derived from alignment at ACJE01000010.1:1800339..1802003- (Aspergillus niger ATCC 1015)
TGCTGCCGTTGCGAAATAAGGACCTGTCTACCCGTCTGGGTCTGAACCAG
GATGAGGGTGAGAAGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGA
CGCCAAGATTGACTACAAGGAGGGCACTGTGATCATGAACCACCCCCCGC
AGTCGGTGTACCAGCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGC
ACGCAAGTTCTGAGATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTT
CTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAA
CCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGG
TCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAG
ATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCGACTA
TGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCCGACG
AGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAG
GAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGG
CAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGC
ACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCGCTTC
CAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTT
CCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGGGGTA
AGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAA
GTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACCCTCT
GGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCT
TCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCC
CCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTA
CCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAACAGCA
ACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAG
GGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGTACGT
TGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATG
TGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAG
GCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGCGGAT
CGACATCAATGCTGCCGTTGCGAAATAAGGACCTGTCTACCCGTCTGGGT
CTGAACCAGGATGAGGGTGAGAAGTGGATCGTCAACCTGATCCGTGACAC
TCGTGTCGACGCCAAGATTGACTACAAGGAGGGCACTGTGATCATGAACC
ACCCCCCGCAGTCGGTGTACCAGCAGGTCATTGAGAAGACCAAGGGTGCT
TTCTTCCGCACGCAAGTTCTGAGATGGCAGCCAACGTTCCTCCTTCCGCT
GAGACCCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGA
GATCGCCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACC
GCCATCTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGAT
GACAAGGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACAT
GACCGACTATGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCA
TCCCCGACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAA
CACTACCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGA
TGTCGTCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCG
AGGAGGAGCACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTAT
GGTCGCTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCT
GTACCAGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCA
CATGGGGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCT
ATGGAGGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAA
CAACCCTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTC
TCTTCCCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTT
TTCTTCTCCCCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGAT
CCTGCGCTACCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACA
AGAACAGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTT
CGCCAGGAGGGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGC
GCTGTACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGG
CCGAGGATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCC
TTCGTTGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCA
CCAGCGGATCGACATCAATGCTGCCGTTGCGAAATAAGGACCTGTCTACC
CGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTCAACCTGAT
CCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGGCACTGTGA
TCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTGAGAAGACC
AAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGATGGCAGCCAACGTTCCT
CCTTCCGCTGAGACCCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGAC
CGCTGAAGAGATCGCCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCT
ACCTCGACCGCCATCTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCC
CAGGAAGATGACAAGGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCA
CACCAACATGACCGACTATGTGGCCAACCTGTGGAAGGAAATTAACGACT
CCGACACCATCCCCGACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCC
AAGTTGCAACACTACCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCA
GGATGAGGATGTCGTCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGA
AGTTCCTCGAGGAGGAGCACGGTGTCACCGCCGATATGGTCAACAGCCTT
TTCGACTATGGTCGCTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGC
TGAGCTGCTGTACCAGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTG
CTTCCGCCACATGGGGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGG
GATGGTGCTATGGAGGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCG
TCTCTTCAACAACCCTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCC
ACTGGTCTCTCTTCCCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTG
ACCGACCTTTTCTTCTCCCCCGCCTACATCAACACCATCCAGACTAGCTG
CCCCTGGATCCTGCGCTACCTCGCCGCCGCCGTCATCACCAACCGCAACC
GTGCCCACAAGAACAGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATC
CGCGTCGTTCGCCAGGAGGGCTACGAATACTCCGACCCCATCACCGACTT
CGTTAAGGCGCTGTACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGT
TGGGTGAGGCCGAGGATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCT
GCCGATGCCTTCGTTGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTG
CAAGATCCACCAGCGGATCGACATCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
INT6ASPNIDRAFT_197459Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197459-T1ASPNIDRAFT_197459-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197459-T1.cdsASPNIDRAFT_197459-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197459-T1.utr3p1ASPNIDRAFT_197459-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197459-T1.exon3ASPNIDRAFT_197459-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197459-T1.exon2ASPNIDRAFT_197459-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197459-T1.exon1ASPNIDRAFT_197459-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197459-T1.utr5p1ASPNIDRAFT_197459-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016650
DBxrefInterPro:IPR019010
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF09440
Producteukaryotic translation initiation factor 3 subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1800339..1802003 -
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