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ASPNIDRAFT_197559-T1, ASPNIDRAFT_197559-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197559-T1
Unique NameASPNIDRAFT_197559-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2077242..2077963+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197559-T1 ID=ASPNIDRAFT_197559-T1|Name=ASPNIDRAFT_197559-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=722bp|location=Sequence derived from alignment at ACJE01000010.1:2077242..2077963+ (Aspergillus niger ATCC 1015)
CAGCTAATCCCTCTTTCTATCCTCCAAAAAACCCCCTCCCATCCGTCACA
ATGGCCCCCGTTGCTGTACGTTTCCTTCCTTGAGACTGCTTTGCTGTTCT
CCCCGAATGGGTCCATATCCATGAAGATGTTTTCTCTGCGTTGAAAAATG
AGAGAATACACTTTTCATGGGAAGAAACCCCGGGGATCCGACATTATGGA
ACAGTAGGCTAATCATATATTTTCGGACTATAGACTCGTGGTCGCAAGGC
CCAGAAGGTCACCAAGAAGGTATGTGCTTATCGCAATCGCAATCGCAGGC
GCAAGTAAAAATCGTGGGTACTAATTGTTTCTCTTATAGTTCGTCATCAA
CGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGA
AGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGT
GACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGC
TCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCACCTT
CCATTGATTTAATACAAGTTGGCAAGATGCTAATTGTTCCTCCAACAGCA
CCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCGTC
TCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAACGA
CGAGGGCGAGGAGGATGAGGAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:2077242..2077963+

>ASPNIDRAFT_197559-T1 ID=ASPNIDRAFT_197559-T1|Name=ASPNIDRAFT_197559-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1584bp|location=Sequence derived from alignment at ACJE01000010.1:2077242..2077963+ (Aspergillus niger ATCC 1015)
ATGGCCCCCGTTGCTACTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAA
GTTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCT
CTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTC
GGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGT
CGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGT
ATGTTCCACCTTCCATTGATTTAATACAAAAGTACCTCAAGAAGCAGCAG
CTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGAGCT
CCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGATGG
CCCCCGTTGCTACTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGTTC
GTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGC
TTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCA
ACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAG
GTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGT
TCCACCTTCCATTGATTTAATACAAAAGTACCTCAAGAAGCAGCAGCTCC
GTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGAGCTCCGC
TTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGATGGCCCC
CGTTGCTACTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGTTCGTCA
TCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTC
GAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCT
CGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTG
TTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCA
CCTTCCATTGATTTAATACAAAAGTACCTCAAGAAGCAGCAGCTCCGTGA
CTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCT
ACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGATGGCCCCCGTT
GCTACTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGTTCGTCATCAA
CGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGA
AGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGT
GACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGC
TCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCACCTT
CCATTGATTTAATACAAAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGG
CTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAA
CGTCGTCAACGACGAGGGCGAGGAGGATGAGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL22ASPNIDRAFT_197559Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197559-T1ASPNIDRAFT_197559-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197559-T1.utr5p1ASPNIDRAFT_197559-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197559-T1.exon1ASPNIDRAFT_197559-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197559-T1.exon2ASPNIDRAFT_197559-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197559-T1.exon3ASPNIDRAFT_197559-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197559-T1.exon4ASPNIDRAFT_197559-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197559-T1.cdsASPNIDRAFT_197559-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR002671
DBxrefInterPro:IPR038526
DBxrefPFAM:PF01776
Product60S ribosomal protein L22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2077242..2077963 +
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