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ASPNIDRAFT_199408-T1, ASPNIDRAFT_199408-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199408-T1
Unique NameASPNIDRAFT_199408-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1735776..1736655+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199408-T1 ID=ASPNIDRAFT_199408-T1|Name=ASPNIDRAFT_199408-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=880bp|location=Sequence derived from alignment at ACJE01000019.1:1735776..1736655+ (Aspergillus niger ATCC 1015)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGT
GCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACC
CCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCA
AAGGCAAGTAAAACCCTCTAGTCATCATCTACTACGAGTGCTATCACGTA
TCCACTGCCTCGAATTGTTTTGAATTCTTTCTCGCTCGAAAGTCAGCTTT
TCCGAGCTCCAAACTGGCCCCTCACTTTCCTAGTAACGTCATGTGGCTTA
TCGGGACAAGCCATATACTTGTCCGGAAACTAACGATGCAGCAGTTACCG
TGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTC
AAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAA
GAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTG
TATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGGTAAGC
CGCCTTGATACGTGGATTCGAGCCACCCATTTACTGACAGCATTCAGTGT
TTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGCTTT
TGGCTGATGGGGAGCAAAGGTCGATGTGTATTAGTGCAACAGCTGTCTTG
ACTATTTACAGGTAATCTTCCTAAACCAAATCCGCCTCACCAAGCTAACA
TGGAATGAGAATAGAAAGGCAACTGTGCAC
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Coding sequence (CDS) from alignment at ACJE01000019.1:1735776..1736655+

>ASPNIDRAFT_199408-T1 ID=ASPNIDRAFT_199408-T1|Name=ASPNIDRAFT_199408-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1593bp|location=Sequence derived from alignment at ACJE01000019.1:1735776..1736655+ (Aspergillus niger ATCC 1015)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGT
GCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACC
CCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTCCATATACTTGTC
CGGAAACTAACGATGCAGCAGTTACCGTGCGCTTTCAGCCACTGCCTTCA
GCTCCCATCCTGAAGAACCGCGTGTTCAAGATTAGTGCCTCGCAAAAGTT
CGAAACAGTCGTGAAATTTCTCAGGAAGAAGCTGGACTGTAAAGAATCCG
ACTCGGTTTTCTGTTATGTCAACAGTGTATTTGCCCCTGGGTTAGACGAA
GGTGTTGGTGGGTTGTGGAGGTGTTTCAAGACTGACGAGCAACTTATCGT
CGCTTACTCTATGACGCCCGCTTTTGGCTGAATGGATTCCCCTTCGCCCC
AGGGCCCCTCGGCCCAAAACTCACCCAAACCCGACCAGGCCAAACTCGCT
CACAGGCCAGCCAATCGTAAACAATCTTCTGATTCTTCCTCGAATACCCA
AAATGCACCTATACCAGACGACAAGCACGGTGCGGACTTACCAATGACCA
TGTCCGCCTCGGTGGTGCTAACCAGCTTACCCCGCGATGCCCACCAAGCA
TTGGCGGATGCTGAGGCTCCATATACTTGTCCGGAAACTAACGATGCAGC
AGTTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACC
GCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTT
CTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGT
CAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGA
GGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCC
GCTTTTGGCTGAATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAA
CTCACCCAAACCCGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTA
AACAATCTTCTGATTCTTCCTCGAATACCCAAAATGCACCTATACCAGAC
GACAAGCACGGTGCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCT
AACCAGCTTACCCCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTC
CATATACTTGTCCGGAAACTAACGATGCAGCAGTTACCGTGCGCTTTCAG
CCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTCAAGATTAGTGC
CTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAAGAAGCTGGACT
GTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTGTATTTGCCCCT
GGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGTGTTTCAAGACTGACGA
GCAACTTATCGTCGCTTACTCTATGACGCCCGCTTTTGGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0000045autophagosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG12ASPNIDRAFT_199408Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199408-T1ASPNIDRAFT_199408-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199408-T1.exon1ASPNIDRAFT_199408-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199408-T1.exon2ASPNIDRAFT_199408-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199408-T1.exon3ASPNIDRAFT_199408-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199408-T1.exon4ASPNIDRAFT_199408-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199408-T1.cdsASPNIDRAFT_199408-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199408-T1.utr3p1ASPNIDRAFT_199408-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_199408-T1.utr3p2ASPNIDRAFT_199408-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265EKJ
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR007242
DBxrefPFAM:PF04110
ProductUbiquitin-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1735776..1736655 +
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