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ASPNIDRAFT_199495-T1, ASPNIDRAFT_199495-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199495-T1
Unique NameASPNIDRAFT_199495-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2322595..2323934-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199495-T1 ID=ASPNIDRAFT_199495-T1|Name=ASPNIDRAFT_199495-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1340bp|location=Sequence derived from alignment at ACJE01000019.1:2322595..2323934- (Aspergillus niger ATCC 1015)
CCGGTTCAAGTCGACAAAGCAGCCAAGATGCCTCGCGGACCGTGAGTAAC
ACGCCCAATGTTGTTCTTACTGCATGCAGCGAGATTACCGGTGGAATTGC
GTTTTCACAGGTCTATCTTCGCTACGGCAGGAGAATTGAAGATTTTGAGG
AGCTGAAAACTAACCACCATGCTCGTACAGTAAGAAGCACCAGAAGCGCC
TTAGCGCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCC
CCCAAGGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGAT
CGTCTTCATCCGCAACCGGTACGAGCCATCCAGCGATTACGAAGGAACCG
AAAGAGAGGATCGGAATAGGAGGACTGACAGGTTTATAGTCTCAAGTACG
CCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGATCAAG
GTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTCATGGA
CGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTACGACA
CCAAGGGTCGCTTCACCGTCCACCGCATCCAGGCTGAGGAGGCCGAGTAC
AAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATCCCATT
CTTGGTTACGCACGATGCGAGAACGTGAGTGCATACTCTCTACAAGTTCC
GCGTCATTCAGTCGTTGGACCAAGCTTTGGTTGATCGGCGGAGGACGACA
GAACTAGAATCGCAGTTCTTTGCTGGAACACAGTAAGGAGCCGCAACTTC
AGAACAAAGTGTGCTAACAAGGGCTTTTTTATAGCATCCGTTACCCCGAC
CCCGCCATCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAA
GATCGCCGACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCG
GTGGTCGTAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCAC
GATGGTGGTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTT
CGCCACCCGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGA
TCTCCCTGCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGT
GACCGCCGCCGTGCCCTCCAGTAGATGTGGCATGGTAAGTGATGTAGGCT
GCCGGAAAAATAAAAGCGTTGCAAAATTCCGCTGTGGCGATGACATCTTG
TCTTGCTTTGTGGACCTGTATGACGCCGGTTACGATAATTATATGAAGCG
TTATCCAGAACAAAAAAAGAAAGAATTGTCTACAGGACAC
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Coding sequence (CDS) from alignment at ACJE01000019.1:2322595..2323934-

>ASPNIDRAFT_199495-T1 ID=ASPNIDRAFT_199495-T1|Name=ASPNIDRAFT_199495-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3108bp|location=Sequence derived from alignment at ACJE01000019.1:2322595..2323934- (Aspergillus niger ATCC 1015)
CATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAGATCG
ACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGGTGTT
GTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCGTTAC
CCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAGGACG
CTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCATCGGT
CAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGCTCTC
CATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAAGTAC
GCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGATCAA
GGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTCATGG
ACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTACGAC
ACCAAGGGTCGCTTCACCGTCCACCGCATCCAGGCTGAGGAGGCCGAGTA
CAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATCCCAT
TCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCTTAGC
GCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCCCCAA
GGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATCGTCT
TCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCCGCCA
TCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGATCGCC
GACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTGGTCG
TAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGATGGTG
GTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGCCACC
CGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCTCCCT
GCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGACCGCC
GCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGACCAA
GGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGCACCG
ACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAAGACC
GGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCGTCCA
CCGCATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAGCGTG
TTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGCGAGA
ACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCCTGGA
CAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCACAAGC
TCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCTCGCG
GACCCATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAG
ATCGACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGG
TGTTGTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCG
TTACCCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAG
GACGCTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCAT
CGGTCAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGC
TCTCCATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAA
GTACGCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGA
TCAAGGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTC
ATGGACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTA
CGACACCAAGGGTCGCTTCACCGTCCACCGCATCCAGGCTGAGGAGGCCG
AGTACAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATC
CCATTCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCT
TAGCGCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCC
CCAAGGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATC
GTCTTCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCC
GCCATCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGAT
CGCCGACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTG
GTCGTAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGAT
GGTGGTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGC
CACCCGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCT
CCCTGCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGAC
CGCCGCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGA
CCAAGGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGC
ACCGACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAA
GACCGGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCG
TCCACCGCATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAG
CGTGTTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGC
GAGAACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCC
TGGACAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCAC
AAGCTCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCT
CGCGGACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495ASPNIDRAFT_199495Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495-T1ASPNIDRAFT_199495-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495-T1.cdsASPNIDRAFT_199495-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495-T1.utr3p1ASPNIDRAFT_199495-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495-T1.exon4ASPNIDRAFT_199495-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199495-T1.exon3ASPNIDRAFT_199495-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199495-T1.exon2ASPNIDRAFT_199495-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199495-T1.exon1ASPNIDRAFT_199495-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199495-T1.utr5p1ASPNIDRAFT_199495-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR041982
DBxrefInterPro:IPR018199
DBxrefInterPro:IPR000876
DBxrefInterPro:IPR038237
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR013845
DBxrefInterPro:IPR032277
DBxrefInterPro:IPR013843
DBxrefInterPro:IPR002942
DBxrefPFAM:PF01479
DBxrefPFAM:PF08071
DBxrefPFAM:PF00900
DBxrefPFAM:PF16121
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2322595..2323934 -
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