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ASPNIDRAFT_199976-T1, ASPNIDRAFT_199976-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199976-T1
Unique NameASPNIDRAFT_199976-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1734028..1734664+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199976-T1 ID=ASPNIDRAFT_199976-T1|Name=ASPNIDRAFT_199976-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=637bp|location=Sequence derived from alignment at ACJE01000009.1:1734028..1734664+ (Aspergillus niger ATCC 1015)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGTAGGTGTCTTTAGCTCTTCATCAACGTGGGAATTCATTCTATGATTT
TGCTGGATATATTTCCATGCTCAATCTTGATAAAGTATACTGCTACTGAG
CATAAGATGAGATACTAAGTGGCTTTTGTCAGGGTTACGCGTTGATCGAA
TACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGATC
CAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGCCAC
CCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGTGGA
CGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGAGGA
GGCTAGAGACTAGGCGTATTGTTGTGGCAGCATTGAG
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Coding sequence (CDS) from alignment at ACJE01000009.1:1734028..1734664+

>ASPNIDRAFT_199976-T1 ID=ASPNIDRAFT_199976-T1|Name=ASPNIDRAFT_199976-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=966bp|location=Sequence derived from alignment at ACJE01000009.1:1734028..1734664+ (Aspergillus niger ATCC 1015)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGGTTACGCGTTGATCGAATACTCCACCCTCCCCGAAGCCTCGGAAGCC
ATCAAGGCTTTGAACGGATCCAAATTGCTGGACCAGACAATCCAGGTCGA
CTTCGCGTTTGTCCGGCCACCCCCATCAAACAAAGGAAAGAACGCTGGAC
AAAGAGGTGGCCGTGGTGGACGGGGACGCAGCAGGAGCCGGGATAGGAGT
CGCAGCCCTGGAGCGGAGGAGGCTAGAGACTAGATGTCTACAGAAATGGA
AGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGTCCCCGCGCAGTCGGGCA
ACAATACCTCTGATCCGAGAACGCAAGCGTCAGCTGTTGCAGTGCGCAGT
ATCGAAGGATGGATCATCATCGCGACCAATATTCATGAAGAGGCCTCTGA
GGAGGACGTGACGGATCTGTTTGCTGAATATGGAGAGATCAAGAACTTCA
ATTTGAACCTCGATCGCCGGACGGGTTATGTGAAGGGTTACGCGTTGATC
GAATACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGG
ATCCAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGC
CACCCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGT
GGACGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGA
GGAGGCTAGAGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199976ASPNIDRAFT_199976Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199976-T1.exon1ASPNIDRAFT_199976-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199976-T1.exon2ASPNIDRAFT_199976-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199976-T1.cdsASPNIDRAFT_199976-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199976-T1.utr3p1ASPNIDRAFT_199976-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199976-T1ASPNIDRAFT_199976-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR033744
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR008111
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1734028..1734664 +
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