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ASPNIDRAFT_200417-T1, ASPNIDRAFT_200417-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200417-T1
Unique NameASPNIDRAFT_200417-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:35190..36225-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200417-T1 ID=ASPNIDRAFT_200417-T1|Name=ASPNIDRAFT_200417-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1036bp|location=Sequence derived from alignment at ACJE01000008.1:35190..36225- (Aspergillus niger ATCC 1015)
ACCGAACGGACTTGCGACGATTTGGATCTGTCCTCATCCCCCACCCAAGC
TTCGAAAGAGACCTTCACAATGGCCGCCAACGTTTCCAGCGACCTCATCT
GGCAGCTCACCCGTACGTCACTAGCACCTTTTTACGCATATCTTATCCAT
TATCCCAATGGAAACCCTAGGAGCCGTTTCGCGCCTCGTCTTCCCCGGCT
AATGTTACGACTACCTCAACAGGCACCCAGAATGCTTTTCTGGTCAAGCG
TAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGA
ACAAGCACTCTTTCAAGGTACGAACCCTGAACGCAAGGTCTGGGTCATGT
TTTCGTGCTAATCTCAAATCACCTGCTTAGTACGCCGGCTATGCCAACAC
CAAGGTACTTTACCCGCGCTTCATGCCATAGAGATTCTTCTGTCAGGGAT
TGGATGTTTAACGCTGCAACAACAGGCGGTTGGTGTCCAGGCCACCGAGA
ACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCT
GCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAA
GTAAGTCAATATGAGCAGTTGGCGTGCTGTGATGTCCGTGAGGGAGGCGC
GACAGTCTGCTGATACTGCTCTCGCATAGGATCTACAAGGGTGTTGCCGA
CAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACGCTGTCG
CCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCC
GCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGA
GTAAATGCCAACTTTTCAATTCGGGAAGGGCTAGGAAGCATGATGTCATG
AGAGCTGGTCGGGATGACCAGAATAGCGCCGTGCTGGCCAAGGGCGGTAA
CATCTATGTAATTTAGCAATACTGCTACCAGGCGGGCATTGTTCTCCGGC
CAGGCCATTCAGAATGGAAACCAAAAAAATCTTGGG
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Coding sequence (CDS) from alignment at ACJE01000008.1:35190..36225-

>ASPNIDRAFT_200417-T1 ID=ASPNIDRAFT_200417-T1|Name=ASPNIDRAFT_200417-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2310bp|location=Sequence derived from alignment at ACJE01000008.1:35190..36225- (Aspergillus niger ATCC 1015)
GATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTG
ATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAG
AAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAG
AAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGA
ACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCT
GCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAA
TACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAG
CGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCA
GAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCT
GGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACG
GCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATC
CGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGG
TGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCC
AGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAAC
CCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGC
CTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCT
TTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCC
CCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCA
GCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGA
CTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGC
GTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCA
GAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAG
CGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAG
AAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTA
CGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGC
ACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTT
CTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCG
CCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTG
TTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGAC
GCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGA
GACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGA
AGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCT
GTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGT
TACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGC
CAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGG
TGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTT
TCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGA
TCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGAT
ATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAA
GGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAA
AGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAAC
GGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGC
CAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATA
CGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCG
TAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGA
ACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGG
CAGCTCACCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417ASPNIDRAFT_200417Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417-T1ASPNIDRAFT_200417-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417-T1.cdsASPNIDRAFT_200417-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417-T1.utr3p1ASPNIDRAFT_200417-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417-T1.exon5ASPNIDRAFT_200417-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200417-T1.exon4ASPNIDRAFT_200417-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200417-T1.exon3ASPNIDRAFT_200417-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200417-T1.exon2ASPNIDRAFT_200417-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200417-T1.exon1ASPNIDRAFT_200417-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200417-T1.utr5p1ASPNIDRAFT_200417-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029004
DBxrefPFAM:PF01778
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:35190..36225 -
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