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ASPNIDRAFT_200566-T1, ASPNIDRAFT_200566-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200566-T1
Unique NameASPNIDRAFT_200566-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:483826..484915+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200566-T1 ID=ASPNIDRAFT_200566-T1|Name=ASPNIDRAFT_200566-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1090bp|location=Sequence derived from alignment at ACJE01000008.1:483826..484915+ (Aspergillus niger ATCC 1015)
CCCAACTACAACAAGGCAAAAAAATCCCCCTCATCCACCACAGCCCTTTG
TTCCGCGTCTAGGTAAGTTGAAATGGAATTCCTTGCCGCGAAGTTCAATT
TTACGGTCGATTTTGGCGATTTCCCGCAGATTTGTGGGTGTACCACGGTC
TGAGAGGGACATCTTCGAACCTCCCACATCCAGCAACCAGTCACGTCCCA
CAGTGCGATTTGCTGACCATCAACTCTACAGCCCTTCTAGGCTCACTCGA
TTTACAAAATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGTT
CCCAAGACCAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTGG
CGATGAGCCCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGCA
ACGAGAAGAAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGTT
CCCGGCATCACTCGTGTCACTCTCCGTCGTCCCAAGAACGTATGAATACG
GCCCTGTCCCTCCTTCCCGTGCGACGCTTAACAAACCCTGCATTCGTGCA
GTTATTGTGGGCGACGAAGGATTTTCAGACTGCAGAGGCTAATCTATCGC
ATATAGATCCTTTTCGTCATCAACCAGCCCGATGTCTACCGTTCCCCCTC
CAGCAACACCTGGATGTATGTGTCTCCATGGACTATGACGAATTGATGAA
TCATATCAAGCTTACATTGTTGCGACAGCATCTTCGGTGAGGCCAAGATC
GAGGACCTGAACGCCACCGCCCAGGCTACCGCTGCCCAGCAGCTTGCTGA
GGCTGCTGCCAACGAGCACGCTGGTCACGACCACGAGCACGACCACGGCA
AGGGCAAGGCCCCCGAGGCTGAGGCCAAGAAGGAGGAGGAAGAGGATGAT
GGCGAGGAGGTCGATGAGTCTGGTCTTGAGGCTAAGGACATCGAACTGGT
TATGGCCCAGGCTAATGTGTCCCGCAAGAAGGCCGTCAAGGCTCTCCGGG
AGAACGACAACGATATCGTCAACTCCATCATGGCTCTCAGCATATGAACA
CCGCCGGAATGAACGCATGAATCGGTGGCTAGCGTCTCTT
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Coding sequence (CDS) from alignment at ACJE01000008.1:483826..484915+

>ASPNIDRAFT_200566-T1 ID=ASPNIDRAFT_200566-T1|Name=ASPNIDRAFT_200566-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1827bp|location=Sequence derived from alignment at ACJE01000008.1:483826..484915+ (Aspergillus niger ATCC 1015)
ATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGTTCCCAAGAC
CAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTGGCGATGAGC
CCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGCAACGAGAAG
AAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGTTCCCGGCAT
CACTCGTGTCACTCTCCGTCGTCCCAAGAACATCCTTTTCGTCATCAACC
AGCCCGATGTCTACCGTTCCCCCTCCAGCAACACCTGGATCATCTTCGGT
GAGGCCAAGATCGAGGACCTGAACGCCACCGCCCAGGCTACCGCTGCCCA
GCAGCTTGCTGAGGCTGCTGCCAACGAGCACGCTGGTCACGACCACGAGC
ACGACCACGGCAAGGGCAAGGCCCCCGAGGCTGAGGCCAAGAAGGAGGAG
GAAGAGGATGATGGCGAGGAGGTCGATGAGTCTGGTCTTGAGGCTAAGGA
CATCGAACTGGTTATGGCCCAGGCTAATGTGTCCCGCAAGAAGGCCGTCA
AGGCTCTCCGGGAGAACGACAACGATATCGTCAACTCCATCATGGCTCTC
AGCATATGAATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGT
TCCCAAGACCAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTG
GCGATGAGCCCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGC
AACGAGAAGAAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGT
TCCCGGCATCACTCGTGTCACTCTCCGTCGTCCCAAGAACATCCTTTTCG
TCATCAACCAGCCCGATGTCTACCGTTCCCCCTCCAGCAACACCTGGATC
ATCTTCGGTGAGGCCAAGATCGAGGACCTGAACGCCACCGCCCAGGCTAC
CGCTGCCCAGCAGCTTGCTGAGGCTGCTGCCAACGAGCACGCTGGTCACG
ACCACGAGCACGACCACGGCAAGGGCAAGGCCCCCGAGGCTGAGGCCAAG
AAGGAGGAGGAAGAGGATGATGGCGAGGAGGTCGATGAGTCTGGTCTTGA
GGCTAAGGACATCGAACTGGTTATGGCCCAGGCTAATGTGTCCCGCAAGA
AGGCCGTCAAGGCTCTCCGGGAGAACGACAACGATATCGTCAACTCCATC
ATGGCTCTCAGCATATGAATGGCCGACCCCCGTGTTGAAGAGCTCCCCGA
CGAGGAGGTTCCCAAGACCAACGTTGAGGATGCCGGCAGCTCCTCCGAGT
CTGAGGCTGGCGATGAGCCCACCATCCCCGGTGGTGCCGCTGTCACCATC
CACTCTCGCAACGAGAAGAAGGCTCGCAAGGCCATTGGCAAGCTCGGCCT
GAAGCACGTTCCCGGCATCACTCGTGTCACTCTCCGTCGTCCCAAGAACA
TCCTTTTCGTCATCAACCAGCCCGATGTCTACCGTTCCCCCTCCAGCAAC
ACCTGGATCATCTTCGGTGAGGCCAAGATCGAGGACCTGAACGCCACCGC
CCAGGCTACCGCTGCCCAGCAGCTTGCTGAGGCTGCTGCCAACGAGCACG
CTGGTCACGACCACGAGCACGACCACGGCAAGGGCAAGGCCCCCGAGGCT
GAGGCCAAGAAGGAGGAGGAAGAGGATGATGGCGAGGAGGTCGATGAGTC
TGGTCTTGAGGCTAAGGACATCGAACTGGTTATGGCCCAGGCTAATGTGT
CCCGCAAGAAGGCCGTCAAGGCTCTCCGGGAGAACGACAACGATATCGTC
AACTCCATCATGGCTCTCAGCATATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005854nascent polypeptide-associated complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EGD2ASPNIDRAFT_200566Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200566-T1ASPNIDRAFT_200566-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200566-T1.utr5p1ASPNIDRAFT_200566-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_200566-T1.utr5p2ASPNIDRAFT_200566-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200566-T1.exon1ASPNIDRAFT_200566-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200566-T1.exon2ASPNIDRAFT_200566-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200566-T1.exon3ASPNIDRAFT_200566-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200566-T1.exon4ASPNIDRAFT_200566-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200566-T1.cdsASPNIDRAFT_200566-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200566-T1.utr3p1ASPNIDRAFT_200566-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016641
DBxrefInterPro:IPR038187
DBxrefInterPro:IPR002715
DBxrefPFAM:PF01849
ProductGAL4 enhancer protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:483826..484915 +
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