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ASPNIDRAFT_200992-T1, ASPNIDRAFT_200992-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200992-T1
Unique NameASPNIDRAFT_200992-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1354553..1355993+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200992-T1 ID=ASPNIDRAFT_200992-T1|Name=ASPNIDRAFT_200992-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1441bp|location=Sequence derived from alignment at ACJE01000013.1:1354553..1355993+ (Aspergillus niger ATCC 1015)
CATACTTCCCACTTCTATATAAAGGCTGTTCCCGGCATCGCACCACAGTT
GCTTTATACTTTTTGATTTGAATCGTTACCAAAGTTTTACCGGTATCCTG
CACCTTCGTCCGGCACCATGACTCTCGCCGAGGAGCTCCGCTCGAGAAAC
TTCAGTACGGACTTGCCTTGTTTACCTGATTTATTCTTTGACATGCGAAG
CAAGGGATAACTAACAACTCATCACTTAGGTATCTACGGACAATGGTTTG
TACCGCTCTTCTCTGTTCCCTTTCTCGCCCGCTGCTGCCCAACTGTGCGC
CTTTGCAACATTTGCGAAAACAAATCATGGTTGCCTGGATCTTCAGCGCT
TGGCGCTGTCATGAAAGGACCTCCATCAGTTGCCGCCTTGGGCAACCGTG
TACTCTGAATGATTGCGCATAAATTTTGGGGGACTGCGACAACAATGGAG
CAATAATTATGGCGTCTACCGGACTAGTTTGCTAATCGATATCTGACGTA
GGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCAAC
ATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTGTG
AGTACTCACCTGAATTTCTTACACTGGTCTCAGACGCTTACAATACACAG
CATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAA
TATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACA
AACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCT
TAGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTAC
TCATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTC
GTCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTA
AGACTATGATCAGAGACGTGATCTATGAAGCTAAGGTACGCCCATTCGCC
TGCCATGCGGCTATTGTATATGCCGTCTTCAGCATGCGTCCTCCGAGCTC
GAAATGAGCCAAATGTAGTTGTATGCTAATCATTTCCTGCAGGTGACTAA
CATGGAACTGAAAAAGAGACGGCTAGCAGAACCATCTCTGGGCTGAATGC
GCCACGATTATGAATCGACTGTGCTGTTCTTGACGCTGCCGAGCAGGGTC
TTGTACTCGTATAGCATACTGTTTTGAGAAATTGGGACCCTTACGGCTCG
AGCTACTGAAGCTTCTACTCATGCTTTGTTGATCTTTCTTCTTTGTGTTG
TATTTCCAGTCCTGTTCTTGCTCTTGAGACTTGCTCAAAAACTGTTGCAA
TGAGTTTTAGATGAATCATGTAATATTTACCATCTCGCCCCAGCGAATAC
CCGATTAGCATCCTGGCGATGAATGAATGGAATTGTTTGCA
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Coding sequence (CDS) from alignment at ACJE01000013.1:1354553..1355993+

>ASPNIDRAFT_200992-T1 ID=ASPNIDRAFT_200992-T1|Name=ASPNIDRAFT_200992-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1800bp|location=Sequence derived from alignment at ACJE01000013.1:1354553..1355993+ (Aspergillus niger ATCC 1015)
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP18ASPNIDRAFT_200992Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200992-T1.utr5p1ASPNIDRAFT_200992-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200992-T1.exon1ASPNIDRAFT_200992-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200992-T1.exon2ASPNIDRAFT_200992-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200992-T1.exon3ASPNIDRAFT_200992-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200992-T1.exon4ASPNIDRAFT_200992-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200992-T1.exon5ASPNIDRAFT_200992-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200992-T1.cdsASPNIDRAFT_200992-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200992-T1.utr3p1ASPNIDRAFT_200992-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_200992-T1.utr3p2ASPNIDRAFT_200992-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200992-T1ASPNIDRAFT_200992-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019365
DBxrefPFAM:PF10233
ProductGolgi apparatus membrane protein tvp18
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1354553..1355993 +
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