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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:72231..74158+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_201277-T1 ID=ASPNIDRAFT_201277-T1|Name=ASPNIDRAFT_201277-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1928bp|location=Sequence derived from alignment at ACJE01000013.1:72231..74158+ (Aspergillus niger ATCC 1015)
CGCCGCGTCTCTGGCCGTGATGGCTCCGGGGCTGGAGTTCGTCGACGCAG
CTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGCATCCCCAGTTTGGCGC
CACGCACCACGCTGGCTGGACGAACCCAAGGTCGTTTCACCATGGCTGGC
CCAGAAGAGACGCCTCAGCTGCGCTTGGCCCATGAACCGTTTGTGCAACC
GGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCAACTCCAAAC
CTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGACCGGGCATG
GTGCCGACCAAGGAGGAGCTGTTGGAAGCCCGTCAAAATATTCAGCTGCC
GGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCAATGACCTAG
AGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATGGCGGCCCAG
GTGGAAGATGCCCGCATCCAGCGTGAGAACAACTTCATGAACAAGATTCT
GAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCTCGCGGACTT
CATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCGCCTGAGAAT
CTCTCGACGGTGCCCGAAGGCGAGACCCCGGCTCCCAGTGAGACCCATGA
GGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCGTCCTGGAGG
AGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATGGACGACCTG
CCCAATCTGGAGGAGATCGAGGCCGCCTATCCGGAAGATCTGCATCCGCT
GGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACACCACCTGGT
CCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCCCTGGGGGTC
TTCGTGCAGCTGTTCGTCGGCTTTTGCGGCGATCTAGCAGTGACCGTGGC
CAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGTTTGCTACCA
TGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACATCTCAATCCG
ACCATCACCATTATGCTATGGTTTTACCGCGGTTTCCCCAAGAGCAAGAT
GCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCGCCGCGCTCG
CCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTCCTGACCAAC
TCCACCACGGGCATCATCACCAGCTTTGTGACAAGTCAGCGCGAGACCTG
GATCGGTCCTGGTACTGCCTTCTTTACCGAATTTCTGGGCACGATGATAC
TGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCACCCCCGGGA
GCGGGTATGAACTCACTCATCGTGGGTCTCATGGTGACCTGCAACACGAT
GAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTCGAGACTTTG
GGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCGCTGTTCACC
AATCCGTACTGGTTTTACGGACCATGGGCCGGATCACTCGCGGGCTCCTT
CCTCGGTGCCTTCCTGTACGACTTTATGATCTTTACGGGTGGTGAATCGC
CGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGAAAGAGTCGG
ATGAAGTGGGGGAAGCGGTTGCATCTGTCACGCCGAGACAGGGGAGAGAA
GACTGTTCGTTGAACAGCAGCGGCGTAGACAAAGGGGAATTCGAATTTAG
TGCAGAATGTTTCACCAGATTGTTTGAGAAAGCCTTGCTACGTGCATGCG
GGATGCATACTAGTGATGTTTGTAGTTACATGATACACTCATATTGACAG
CAATAAGCGATGAACGTTGTACATACGCATTGATGATTCGGATTCTGGAC
ACAATATATATATTGTATATAGTTCAAA back to topCoding sequence (CDS) from alignment at ACJE01000013.1:72231..74158+ >ASPNIDRAFT_201277-T1 ID=ASPNIDRAFT_201277-T1|Name=ASPNIDRAFT_201277-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1572bp|location=Sequence derived from alignment at ACJE01000013.1:72231..74158+ (Aspergillus niger ATCC 1015)
ATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGCCCATGAACCGTT
TGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCA
ACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGA
CCGGGCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGCCCGTCAAAATAT
TCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCA
ATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATG
GCGGCCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAACAACTTCATGAA
CAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCT
CGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCG
CCTGAGAATCTCTCGACGGTGCCCGAAGGCGAGACCCCGGCTCCCAGTGA
GACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCG
TCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATG
GACGACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTATCCGGAAGATCT
GCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACA
CCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCC
CTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGGCGATCTAGCAGT
GACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGT
TTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACAT
CTCAATCCGACCATCACCATTATGCTATGGTTTTACCGCGGTTTCCCCAA
GAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCG
CCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTC
CTGACCAACTCCACCACGGGCATCATCACCAGCTTTGTGACAAGTCAGCG
CGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTTCTGGGCA
CGATGATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCA
CCCCCGGGAGCGGGTATGAACTCACTCATCGTGGGTCTCATGGTGACCTG
CAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTC
GAGACTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCG
CTGTTCACCAATCCGTACTGGTTTTACGGACCATGGGCCGGATCACTCGC
GGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTTACGGGTG
GTGAATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGA
AAGAGTCGGATGAAGTGGGGGAAGCGGTTGCATCTGTCACGCCGAGACAG
GGGAGAGAAGACTGTTCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023271 |
| DBxref | InterPro:IPR000425 |
| DBxref | PFAM:PF00230 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:72231..74158 + |
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