|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1275355..1276289- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_201712-T1 ID=ASPNIDRAFT_201712-T1|Name=ASPNIDRAFT_201712-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=935bp|location=Sequence derived from alignment at ACJE01000002.1:1275355..1276289- (Aspergillus niger ATCC 1015)
AAGTCACTCCAGATTTGAGCGATCCAGCACCCTGACAACATCTCTCTCGA
CCGTTCCCGCTTCAAGCCAAAGTAGACTTTTACAGCTATAGATATCGAAC
TGTGAAACCGTATTTCTCTTGCGCCATTCACCATGGAGACCCTCAAAGCA
GTCTTTTTCGGCCCGGATCCTCAAACACAGGCAAGTGCCGATTTTGTCCA
GCCACAATGTCTGGCGCTTCTGACCGTGATTGCTGTCTCTAGATGAGAAA
ATGTAACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCGTGACATCG
CACAACTGAAGACTCTGGAAAGCAAGACACGACAATACATTATGAATTCG
TCGAAGCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCCAACATGGA
GGCCAAGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCAGTCTACCC
GGTTACATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGCAGGTCAAT
GAGGCCTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAATCGACGGG
GATTATGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCTGAATGCCA
CGATGCGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCATCGAGGAG
ATGGTCGATGACGCCATTCCTAACAACGAGTTACTGGAGGAAGAGGAAGA
GGAAGCAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCTCCATGGCA
AGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGGAAGAGGCT
CCGGAGCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTAGAGCAGAT
GCGAGGACGGCTCGAAGCCTTGAAGAGCTGAGGAACAATGAAGACGTTTG
CGTGCATCTGCATCTTCGGGCCTATGTGACAATGG back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1275355..1276289- >ASPNIDRAFT_201712-T1 ID=ASPNIDRAFT_201712-T1|Name=ASPNIDRAFT_201712-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1374bp|location=Sequence derived from alignment at ACJE01000002.1:1275355..1276289- (Aspergillus niger ATCC 1015)
ATGAGAAAATGTAACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCG
TGACATCGCACAACTGAAGACTCTGGAAAGCAAGACACGACAATACATTA
TGAATTCGTCGAAGCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCC
AACATGGAGGCCAAGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCA
GTCTACCCGGTTACATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGC
AGGTCAATGAGGCCTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAA
TCGACGGGGATTATGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCT
GAATGCCACGATGCGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCA
TCGAGGAGATGGTCGATGACGCCATTCCTAACAACGAGTTACTGGAGGAA
GAGGAAGAGGAAGCAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCT
CCATGGCAAGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGG
AAGAGGCTCCGGAGCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTA
GAGCAGATGCGAGGACGGCTCGAAGCCTTGAAGAGCTGAATGGAGACCCT
CAAAGCAGTCTTTTTCGGCCCGGATCCTCAAACACAGATGAGAAAATGTA
ACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCGTGACATCGCACAA
CTGAAGACTCTGGAAAGCAAGACACGACAATACATTATGAATTCGTCGAA
GCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCCAACATGGAGGCCA
AGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCAGTCTACCCGGTTA
CATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGCAGGTCAATGAGGC
CTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAATCGACGGGGATTA
TGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCTGAATGCCACGATG
CGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCATCGAGGAGATGGT
CGATGACGCCATTCCTAACAACGAGTTACTGGAGGAAGAGGAAGAGGAAG
CAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCTCCATGGCAAGTTG
TCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGGAAGAGGCTCCGGA
GCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTAGAGCAGATGCGAG
GACGGCTCGAAGCCTTGAAGAGCTGAATGGAGACCCTCAAAGCAGTCTTT
TTCGGCCCGGATCCTCAAACACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926510L |
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1275355..1276289 - |
|
