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ASPNIDRAFT_201957-T1, ASPNIDRAFT_201957-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201957-T1
Unique NameASPNIDRAFT_201957-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1202229..1203554+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201957-T1 ID=ASPNIDRAFT_201957-T1|Name=ASPNIDRAFT_201957-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1326bp|location=Sequence derived from alignment at ACJE01000006.1:1202229..1203554+ (Aspergillus niger ATCC 1015)
CTTCAATAACGCATCCTGCTTTCCCTCCTGCATTCCATCATCCCGCCACC
TTCCACACCATCCTCCGACCTCCACCTTTCTCGCTTTTCACCGTACTCTC
TGCCGTCAAGTCTCTCGTTGCGACTTCCCGCCTCATCCCCTACGACAGGA
ACAGGCAGCAGCCCGTCACTTTCCACCTAGGTAGTCTGGTGACTTGCCAG
GTCCTACACCCCCGAATACCGAATACATAGAATCTATCGCGCACGAGAAT
CATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGG
CTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAA
ATCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCC
ACAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTT
CATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTT
TTTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATT
TACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGAC
ACAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGA
TTCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCC
GCAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAG
ATGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTAT
CGTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGG
ACTCGGAAAAACATCCCGGAATGCGCTAACAGCTCTCTCCTTTCAGTTGT
CGCCACCAAACATTAAGCTACGATTACACAGCGCGACAGTCATGATCGGC
TTGGGAATGGATGACGATTTTTCTTTCGCCTGGCCCTGGTTTATCTGTGT
TGAGACGAAGCCGTTGTTTCCAGCTATTAATACCACCTGCTTTTTTCTCG
GGCGTCCAACCTCGTTCTCACGAATAAAGTCTTGTTGTCTCTATACGCCA
TGGACGCTATGAGCCGGTTTGGAGATCGAGGCTATGCCACATGATTCCAT
CGACGGTGAAGATGTAAATGATACTCCGGTGCTTCCTCGTGTTCAAGTAT
CAGTGCTGTTTTGTTGGTTTTGGTCTCCTATGTTTGCCCTTGTCCTTTTC
TTTTTCCTTTTTTTTCCTCATGTATTTCCTTTGTGCCTTTCCTTTTAGCC
TTTAATGGACCTCTGCTCCAGATTAC
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Coding sequence (CDS) from alignment at ACJE01000006.1:1202229..1203554+

>ASPNIDRAFT_201957-T1 ID=ASPNIDRAFT_201957-T1|Name=ASPNIDRAFT_201957-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1080bp|location=Sequence derived from alignment at ACJE01000006.1:1202229..1203554+ (Aspergillus niger ATCC 1015)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGTTGTCGCCAC
CAAACATTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCG
CCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGG
ACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTC
CAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGG
ACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCC
AACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTG
CCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAG
TTGTCGCCACCAAACATTAAATGTCCGAGCAGCCCTATGATCCCTACATC
CCCTCTGGCGCCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGG
CGACCCCAGGACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGTTGTCGCCACCAAACATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYB1ASPNIDRAFT_201957Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201957-T1ASPNIDRAFT_201957-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201957-T1.utr5p1ASPNIDRAFT_201957-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201957-T1.exon1ASPNIDRAFT_201957-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201957-T1.exon2ASPNIDRAFT_201957-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201957-T1.exon3ASPNIDRAFT_201957-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201957-T1.cdsASPNIDRAFT_201957-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201957-T1.utr3p1ASPNIDRAFT_201957-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016444
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
Product synaptobrevin
ProductSNAP receptor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1202229..1203554 +
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