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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:256512..257393+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_202139-T1 ID=ASPNIDRAFT_202139-T1|Name=ASPNIDRAFT_202139-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=882bp|location=Sequence derived from alignment at ACJE01000006.1:256512..257393+ (Aspergillus niger ATCC 1015)
GTCTTGTTCCTTGGAATTCTCGTCCTTATTATTTCCTCTCCTATAGCAAC
TTACTCTACGAATACCATACAGTCGCTATCTATCTTACCTCAAAATGTTG
ATCAAGTGAGTTGTTGTCCGCCCATGACGCACGCAGATACCCTCTGTCGC
GATAGCAAAGCTAATCGGCGTCAACCTCCAGAGTCCGTACCCTTACTGGC
AAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGGTACATACACACAT
CTACACATCCACAGACATATATATGTCTTTGCAATCTCGCCCCATCCGCG
TGTGGTGATTGTTAGCTGGTCTTACTAGCCGGCTGCAACAACTCCGCTCG
CACACGACCAGCCACCCACCCCACGGACCTATGATACTTTCTTCCGCGCA
GTCGCTAACAAGTACATATGCAGGTGTCCCGGATAAAGGAGCGTGTTGAA
GAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTGGAAA
GCAGATGTACGCATACACCCGTTTCCCTATTCCTACACTTGGGGATGTAT
AATCGCTATGCTTTGGGCCAAATACTGATAAAGGGACTTTCATGAATATA
GGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGTGCCACG
CTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGAATGTGTGTGGT
ATGACAGAAGGGGGAATAAAGAGGAAGATATCTGTATGTTGCTTTCAAGG
CCGGTATTCTGAACGCTATGTAGCGTTGGTTTTTGTTTCGAGGCTATGGG
CATGCATGTAGGTTTTGATCCTGGGGCGGAGGGTTTTAATGAGCTACAAA
CCAACAATGCAGTAATGACAGTTTTCTACATA back to topCoding sequence (CDS) from alignment at ACJE01000006.1:256512..257393+ >ASPNIDRAFT_202139-T1 ID=ASPNIDRAFT_202139-T1|Name=ASPNIDRAFT_202139-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=948bp|location=Sequence derived from alignment at ACJE01000006.1:256512..257393+ (Aspergillus niger ATCC 1015)
ATGTTGATCAAAGTCCGTACCCTTACTGGCAAGGAGATCGAGTTGGACAT
CGAGCCGGATTACAAGGTGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAG
AGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTGGAAAGCAGATG
GCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGTGCCACGCT
ACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGAATGTTGATCAAAG
TCCGTACCCTTACTGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTAC
AAGGTGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCC
TGTTCAGCAGCGATTGATTTTCGGTGGAAAGCAGATGGCCGACGACAAGA
CTGCATCGGAATATAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCTT
GCTCTGCGTGGTGGATGCTTGTGAATGTTGATCAAAGTCCGTACCCTTAC
TGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGGTGTCCCGGA
TAAAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGA
TTGATTTTCGGTGGAAAGCAGATGGCCGACGACAAGACTGCATCGGAATA
TAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGTG
GATGCTTGTGAATGTTGATCAAAGTCCGTACCCTTACTGGCAAGGAGATC
GAGTTGGACATCGAGCCGGATTACAAGGTGTCCCGGATAAAGGAGCGTGT
TGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTG
GAAAGCAGATGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGT
GGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR038738 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF11976 |
| Product | nedd8-conjugating enzyme UBE2F |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:256512..257393 + |
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