You are here

Home

ASPNIDRAFT_202682-T1, ASPNIDRAFT_202682-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202682-T1
Unique NameASPNIDRAFT_202682-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1447805..1448645-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202682-T1 ID=ASPNIDRAFT_202682-T1|Name=ASPNIDRAFT_202682-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=841bp|location=Sequence derived from alignment at ACJE01000020.1:1447805..1448645- (Aspergillus niger ATCC 1015)
ATTCATTCCTCTTCCCTTTCCCCTCCAGTCTTTCCAATTCCTCCTGCTCT
TTTTCCTTCCTCCAGACAGCCTTCTGTACAGTCCTTGCCACTTTTCCTTT
CCCCCCTCCAAGAATATATAGGCCTTCTGTGTCCTTGTCGTGGAGAATTG
CCTGCCTTCCAAACTTCCTCTTCCACTTCCAACAAACAACTTATTAATCG
CTTAATTCGGTCGCGTCGGACACCAGCGGTTTCTCTCGATTCCTCGCTCT
CCATCCTCACGACTACCTTATAATCTATAACCCTCTACCTTCTTTCCTCC
CATCATACAAAATGCGTGCCACTTTTGCTCTGCGCAGCGCTGCCCGCACC
CCCCTCATCCGGTTCCTCGGCCGGCGTTCCGTGCCTCGTATGTATTCCAA
CCCCGTCAACTCTACGCGCCTGCTCCTTTTGTCTAACATGACCGTCTACA
GAGTCCGTTGACCACACCCCCCGTCCTCACCCCGCTTCTCCTTCCGGAAT
CCTCCCGGACTCCTTCGCCGCCTACCGTATCAAGGCTCAGCAGCACGGCC
CTCTTGGCCGTGCCTCTTTCTCTCAGGGCATTGGCCGCAGCTCTGGTGCC
TCTCTGGGCCCCGTTCAGCCTAAGCAGGGTGAATTTTTCGACCGCGACGA
GCTTCCTGCTCGCTTCCACCGTCTTCCTTGGTCCGAGGCTGAGATTGAGG
CCATTGAGACCGGCGGTGCCAGCCTGTTCGCTTAGATCCTTCCGGATATC
ACTCAACGAGAGATGACGCAACGGTAGCGGTCACGGTTTGGTGATTGACG
AAACACTATCGTGTTAAAATAGAGTACGACCATTGGCTTGG
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1447805..1448645-

>ASPNIDRAFT_202682-T1 ID=ASPNIDRAFT_202682-T1|Name=ASPNIDRAFT_202682-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=720bp|location=Sequence derived from alignment at ACJE01000020.1:1447805..1448645- (Aspergillus niger ATCC 1015)
AGTCCGTTGACCACACCCCCCGTCCTCACCCCGCTTCTCCTTCCGGAATC
CTCCCGGACTCCTTCGCCGCCTACCGTATCAAGGCTCAGCAGCACGGCCC
TCTTGGCCGTGCCTCTTTCTCTCAGGGCATTGGCCGCAGCTCTGGTGCCT
CTCTGGGCCCCGTTCAGCCTAAGCAGGGTGAATTTTTCGACCGCGACGAG
CTTCCTGCTCGCTTCCACCGTCTTCCTTGGTCCGAGGCTGAGATTGAGGC
CATTGAGACCGGCGGTGCCAGCCTGTTCGCTTAGATGCGTGCCACTTTTG
CTCTGCGCAGCGCTGCCCGCACCCCCCTCATCCGGTTCCTCGGCCGGCGT
TCCGTGCCTCAGTCCGTTGACCACACCCCCCGTCCTCACCCCGCTTCTCC
TTCCGGAATCCTCCCGGACTCCTTCGCCGCCTACCGTATCAAGGCTCAGC
AGCACGGCCCTCTTGGCCGTGCCTCTTTCTCTCAGGGCATTGGCCGCAGC
TCTGGTGCCTCTCTGGGCCCCGTTCAGCCTAAGCAGGGTGAATTTTTCGA
CCGCGACGAGCTTCCTGCTCGCTTCCACCGTCTTCCTTGGTCCGAGGCTG
AGATTGAGGCCATTGAGACCGGCGGTGCCAGCCTGTTCGCTTAGATGCGT
GCCACTTTTGCTCTGCGCAGCGCTGCCCGCACCCCCCTCATCCGGTTCCT
CGGCCGGCGTTCCGTGCCTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682ASPNIDRAFT_202682Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682-T1ASPNIDRAFT_202682-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682-T1.cdsASPNIDRAFT_202682-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682-T1.utr3p1ASPNIDRAFT_202682-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682-T1.exon2ASPNIDRAFT_202682-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202682-T1.exon1ASPNIDRAFT_202682-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202682-T1.utr5p1ASPNIDRAFT_202682-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020373
DBxrefPFAM:PF10937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1447805..1448645 -
Powered by Drupal