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ASPNIDRAFT_202783-T1, ASPNIDRAFT_202783-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202783-T1
Unique NameASPNIDRAFT_202783-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1600598..1602212-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202783-T1 ID=ASPNIDRAFT_202783-T1|Name=ASPNIDRAFT_202783-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1615bp|location=Sequence derived from alignment at ACJE01000001.1:1600598..1602212- (Aspergillus niger ATCC 1015)
CTACATCGGCTTGTTGCCACGCCTAATACCTTTGTCCTGTAACTTCAGCT
CTCCACCTTTTCATCAAACAACTCTCTTAATTTCACCTACGTTGACGTGC
CGTCCAAGTGCTCCATCATGAACCCCGAGTGGTAAGTGCCCTTGATCGTC
TGTATTTGGCCTACAGCTCATCAGGTTCTGGCGATTCTCCCCCCTTGCCA
TGATGGCACTACGTCTTTTCATCCACAAATTTCTTGTTTCTTGTTTTTCG
TGCTAATTTGAATCGCTATTAGAGCCTCCACGATCCTCCGTCTCTCCCAT
GCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGCTA
ATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAGAC
TCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACCTA
TACGGAGAGCTACATCTCCACCATCGGAGTTGACTTCGTACGTATCTGGC
CTCTCATTATTCATCACAGCTGCTAGCAGTGAACTGCGTCATAGATCCAC
ATCTAACGTTCCAATACAGAAAATTCGTACCATCGAGCTGGATGGAAAGA
CGGTGAAACTCCAGATCGTAAGGCAGCCCCGTTCACAACAGTCGCTCACC
TGGCTTAACTAACGGGCGCTCTAGTGGGATACTGCAGGCCAGGAACGTTT
CCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTCG
TCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCTT
CAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCGG
AAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCTA
AGGTATGTGGCCAGACCTTGGTGTGGGACTCTTCATTTCTGGCAGAGTGG
GTGATTGACGCAATGTGTTGTTGGTTTAGGAATTCGCCGACAGCCTTGGG
ATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGC
TTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTG
TCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCC
GGCTCCGCGGGCGGCTGCTGCTAGACTATTGATGATCCTAATCCCGCGTT
GCATTACGCCATATTGAGACTGTGTGAAAATTTGGTGATTAAAGAAGAGG
AGCGATGAGGGAGGCTACCTGCTGCACCCTGCTGCCGGGCAGTCTTTCTC
GAATGCCAGCATTATCTCAAATGTTCTATGCTGGTAATGGTCACCGGGAG
TAGTTTTCTTTGTTATGCTTTAGAAGGCTTTCGTTTCGTCTTATACATGG
TGCACTATGGATAATTTTGTGTCAGGTTTTCCCTTTCCTCCTCTCGGTCA
TCTATCATCCCCTCCCTATCTTTTCCTGTCACTATTGTCTTGCTCGTGGC
CTTTCCCTAACTCGAAGCATTTTCTATCTGGTTCGTTGAATTTTCTTTAG
TTGGATCCGTTGCGTGATTATGTCTGGGTCAATTAATGCAGAAGTTAATG
ATACTTAGTGAATAT
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Coding sequence (CDS) from alignment at ACJE01000001.1:1600598..1602212-

>ASPNIDRAFT_202783-T1 ID=ASPNIDRAFT_202783-T1|Name=ASPNIDRAFT_202783-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2640bp|location=Sequence derived from alignment at ACJE01000001.1:1600598..1602212- (Aspergillus niger ATCC 1015)
GAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCTCGGCGAAGAA
CGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGGCAGATCAAGG
AACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGTGCAGGTTGGC
CAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCTGCTAGTGGGA
TACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTG
GTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTC
AACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGG
TGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGG
TCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGAGCTGGATGGA
AAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCGCGGCCCTCTG
TGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATACGATTATCTTT
TCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTC
CTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCTCCACCATCGG
AGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCT
CGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGG
CAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGT
GCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCT
GCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCT
TACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACAT
GGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACG
CCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAA
GACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGA
GCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCG
CGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATAC
GATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTC
GTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCT
CCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTC
TTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGAC
AATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACA
AGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCG
GGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAAT
CACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATG
TTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATT
GATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAG
CGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTC
GTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTAC
TTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTT
GGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTG
TCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAG
AGCTACATCTCCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGG
GATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGG
CTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACT
GTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATC
CGGCTCCGCGGGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTT
TCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTC
GTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCT
TCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCG
GAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCT
AAGAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGAT
CATGCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATG
CTAATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGA
GACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATAC
CTATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT1ASPNIDRAFT_202783Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202783-T1ASPNIDRAFT_202783-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202783-T1.cdsASPNIDRAFT_202783-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202783-T1.utr3p1ASPNIDRAFT_202783-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202783-T1.exon5ASPNIDRAFT_202783-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202783-T1.exon4ASPNIDRAFT_202783-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202783-T1.exon3ASPNIDRAFT_202783-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202783-T1.exon2ASPNIDRAFT_202783-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202783-T1.exon1ASPNIDRAFT_202783-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202783-T1.utr5p2ASPNIDRAFT_202783-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_202783-T1.utr5p1ASPNIDRAFT_202783-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductGTP-binding protein of the rab
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1600598..1602212 -
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