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ASPNIDRAFT_203622-T1, ASPNIDRAFT_203622-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_203622-T1
Unique NameASPNIDRAFT_203622-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:582414..583362-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_203622-T1 ID=ASPNIDRAFT_203622-T1|Name=ASPNIDRAFT_203622-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=949bp|location=Sequence derived from alignment at ACJE01000016.1:582414..583362- (Aspergillus niger ATCC 1015)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGTAAGAACGCCCGATCCCGACGAATCCGAGAAATTCGAACACAAAG
CCGCCGAGGAAGGAGGATATGACAACTGTGTTATGGAATGGATGGCTGAT
GGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTACACCGTCCGTACCT
TCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGT
CCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGA
GCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCT
CCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTAC
GGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCTACGCAGT
CCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGGACAAGTC
GAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGTGAGCGTG
TCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATC
ACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGT
CCGGTAAATGCCCTCATCCACGGGGTCTTCAGGAGGGAAAGCTCCGGGGT
TGTGTTTATGATGAATCGATCAAAAATGGTCAGAAAAGGAGGCAGGCGTT
CTTGAAAATCATTATCGCTCTGCTCTGAAATATGGCTTTTCTACCACGGC
ATGAGGTTAGGCGTGTTAGAGATATCAAATTCCCAAATTTTTCATACGC
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Coding sequence (CDS) from alignment at ACJE01000016.1:582414..583362-

>ASPNIDRAFT_203622-T1 ID=ASPNIDRAFT_203622-T1|Name=ASPNIDRAFT_203622-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1593bp|location=Sequence derived from alignment at ACJE01000016.1:582414..583362- (Aspergillus niger ATCC 1015)
GACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTA
TCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTTCAAG
AACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGTTACACCGTCCGT
ACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCG
TGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGT
ACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGT
ATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTAT
CTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGAATCCAAGGACAA
GTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTTAACA
TCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTC
GAGCAGCTGAGCGGTCAGACTCCGGTCTACAGACCCGCCCTGGTGAGCGT
GTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTAT
CACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCG
TCCGGTAAGCAAGGCCCGTTACACCGTCCGTACCTTCGGTATCCGTCGTA
ACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAG
ATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAA
CTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATC
TGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTAC
TGCTGCATATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGC
GAGCTGCGCATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGG
TGACAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGA
CTCCGGTCTACAGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCT
GCAAGGCCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATC
AAGTGGTTCAAGAACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGT
TACACCGTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCA
CGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCA
AGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAAC
TTCGGTTTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCC
CGGTATCGGTATCTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGA
ATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGC
TCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCT
GCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTCTACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL11ASPNIDRAFT_203622Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203622-T1ASPNIDRAFT_203622-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203622-T1.cdsASPNIDRAFT_203622-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203622-T1.utr3p1ASPNIDRAFT_203622-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203622-T1.exon3ASPNIDRAFT_203622-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_203622-T1.exon2ASPNIDRAFT_203622-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_203622-T1.exon1ASPNIDRAFT_203622-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09264X8J
DBxrefInterPro:IPR020929
DBxrefInterPro:IPR031310
DBxrefInterPro:IPR002132
DBxrefInterPro:IPR031309
DBxrefInterPro:IPR022803
DBxrefPFAM:PF00673
DBxrefPFAM:PF00281
Product60S ribosomal protein L11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:582414..583362 -
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