You are here

Home

ASPNIDRAFT_204315-T1, ASPNIDRAFT_204315-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_204315-T1
Unique NameASPNIDRAFT_204315-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:148880..149522+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_204315-T1 ID=ASPNIDRAFT_204315-T1|Name=ASPNIDRAFT_204315-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=643bp|location=Sequence derived from alignment at ACJE01000012.1:148880..149522+ (Aspergillus niger ATCC 1015)
CAGCTATACACCATGGCTGTCCCCTCCGGCCTCCCCAACTACACTCGCCA
CATAACCTCCCACAACTCCTCTGGCGAGGCAATAATACACTCCTCCACAG
CAGGCGACTGGTCAAGCATCGGGGACGACAGATTCGGCTTCAGCGTCGCC
TACACGACCTCGTCCTTCCCGCCCGACCTCAACAATGACGCCGATATTTC
TACCCACACTGCCAAAATGGAATCCAAGAACCTCGGGCTCGTCAGCCCCA
ACGGCACCGTCTGCCGCGTGGTGGACTTTGCGCCAAACACAGACCCATTC
ATGCACCGCACGCGGAGTTTAGACTACGGAGTTGTCCTGGAGGGCGAAAT
CATCATGGAGCTGGACTCGGGGGAGAAAGTGACGATGAAGAAGGGCGACA
TAGCCGTGCAGCGGGGGACGATGCACGGATGGCGCAACCCAAGCAAGGAG
AACTGGACGCGAATGCTGTTCGTGCTGCAAGACTGCAAACCCATCACTGC
AGAGGGAGGCAAGCAGCTGGGTGAAGATCTGGGACATTCGTCGGATTTGC
CTCCCTCCGACGGAGCTAATCAATAGCTTTTATCAATACACTGATTCTCC
ATACACACACCGATAATGAATTACACGCTCAAGGAACTTGAAT
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:148880..149522+

>ASPNIDRAFT_204315-T1 ID=ASPNIDRAFT_204315-T1|Name=ASPNIDRAFT_204315-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=564bp|location=Sequence derived from alignment at ACJE01000012.1:148880..149522+ (Aspergillus niger ATCC 1015)
ATGGCTGTCCCCTCCGGCCTCCCCAACTACACTCGCCACATAACCTCCCA
CAACTCCTCTGGCGAGGCAATAATACACTCCTCCACAGCAGGCGACTGGT
CAAGCATCGGGGACGACAGATTCGGCTTCAGCGTCGCCTACACGACCTCG
TCCTTCCCGCCCGACCTCAACAATGACGCCGATATTTCTACCCACACTGC
CAAAATGGAATCCAAGAACCTCGGGCTCGTCAGCCCCAACGGCACCGTCT
GCCGCGTGGTGGACTTTGCGCCAAACACAGACCCATTCATGCACCGCACG
CGGAGTTTAGACTACGGAGTTGTCCTGGAGGGCGAAATCATCATGGAGCT
GGACTCGGGGGAGAAAGTGACGATGAAGAAGGGCGACATAGCCGTGCAGC
GGGGGACGATGCACGGATGGCGCAACCCAAGCAAGGAGAACTGGACGCGA
ATGCTGTTCGTGCTGCAAGACTGCAAACCCATCACTGCAGAGGGAGGCAA
GCAGCTGGGTGAAGATCTGGGACATTCGTCGGATTTGCCTCCCTCCGACG
GAGCTAATCAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315ASPNIDRAFT_204315Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315-T1.utr5p1ASPNIDRAFT_204315-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315-T1.exon1ASPNIDRAFT_204315-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315-T1.cdsASPNIDRAFT_204315-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315-T1.utr3p1ASPNIDRAFT_204315-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204315-T1ASPNIDRAFT_204315-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR013096
DBxrefInterPro:IPR014710
DBxrefPFAM:PF07883
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:148880..149522 +
Powered by Drupal