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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:2955316..2956688- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_205564-T1 ID=ASPNIDRAFT_205564-T1|Name=ASPNIDRAFT_205564-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1373bp|location=Sequence derived from alignment at ACJE01000004.1:2955316..2956688- (Aspergillus niger ATCC 1015)
CCCGATTCTCGCTCTTCTTTGACCTTTACACTTAATTTCTTCCATTTTCA
AGTTTCGCGCCGCGGTGTGCTAAACCCCCTTAGCCATGGACGAGGACTAC
TCTGCAGGCTCCGTGGACGCCGACCGCGAGATGACCAGGCTCTGGCGCAC
ATGGCGGACAGTCTTTGAGATGCTTTTGGATCGTGTAAGAATTTTCTCCA
GTTCCAGCTCCAGCGACGCTACAATAGCCACCCCGCGAACATTCCACTGA
CCGAATCCCCAAATCCACAGGGCTACGAGGTGACCGAAGATGAAGTCCAA
ATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGACCCTCTAGGATACCC
CGAGTATGCGCGCCTTCTATCCCATCCAATTCCCCCCAGTCAACTCCCAT
CTAACCCAAAATCCCATCACACAGCCGCAACAAGATGAAAATCAGCGCCC
GGCCCACGGAAGCCATGCAAGCGAAATACACCCCCCTGCCCAGCAAATCC
AACCCGAACCCCCAGCCCGACTGCGGTACCATCTACGTTGAATTCTGCCC
GGACTCGACCGGCGTCGGCACCAAGCAAGTGCGTACCTTCAACCACTTCG
TCGACGAGAACAACTTCCACACCGGCGTGTTCATCACCCAGACTCCGATC
TCGCCATCCGCTGTGCGCCTGCTGAGCAGCATGCCCGGCCGCATCTGCGA
GCATTTCCAGGAGCAGGATCTGCTGGTCAACATCACCCGCCACGAACTGG
TCCCGAAACACGTCCTGCTTAGCCCCGATGAGAAGGCTCGTTTGTTGGAA
CGCTACCGTCTGAAGGAGTCGCAGTTGCCTCGTATACAGGTGTCTGATCC
TGTTGCCAGATACCTGGGTCTGCGCAGAGGTCAGGTCGTGAAGATTATTC
GGAGAAGTGAGACGGCTGGTCGGTATGCCAGTTATCGGTGGGTTATATAA
TCGCTGGATTGTTTTTTTGGGGGGTCCTGGGATGAGAGAACTGAGTTGTC
TCCGATTATGGCGATATGCTTATTGCTGAGCCGGAGGTACAATCCCCATC
TCCATCCCGACGCAGGTCCAGCAAAACGATCCAATGTGCCCTTCGGAAGA
GTCTATCAAAGACACAGAAAACAAAGAACAGGAACAAGAAAAGAGAGGCT
GGGTTGGAAGGAAAAGGAGGGAGGAAAAGAAAGAAAAGAAAAAGAAAAAT
TTACCGAATACAGGCATCGGGCAGCATGGCGTAACGGCGAAAAATCTTCT
CGAAAGTGTGTTTCTTAACGGGTGGTGTATGTGTGTATGTCTATGCTATG
TCTCTTTTTATCTTCCGTTTTGACGTTAAGGTGTGCTTCGGTTTCACCTC
TATTCTCCAACTACAAATATATC back to topCoding sequence (CDS) from alignment at ACJE01000004.1:2955316..2956688- >ASPNIDRAFT_205564-T1 ID=ASPNIDRAFT_205564-T1|Name=ASPNIDRAFT_205564-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2124bp|location=Sequence derived from alignment at ACJE01000004.1:2955316..2956688- (Aspergillus niger ATCC 1015)
CCGCAACAAGATGAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGA
AATACACCCCCCTGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGC
GGTACCATCTACGTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAA
GCAAGTGCGTACCTTCAACCACTTCGTCGACGAGAACAACTTCCACACCG
GCGTGTTCATCACCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTG
AGCAGCATGCCCGGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCT
GGTCAACATCACCCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCC
CCGATGAGAAGGCTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAG
TTGCCTCGTATACAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCG
CAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGT
ATGCCAGTTATCGGTGGGTTATATAAGGCTACGAGGTGACCGAAGATGAA
GTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGACCCTCTAGG
ATACCCCGAATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCG
CGAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTT
TGGATCGTCCGCAACAAGATGAAAATCAGCGCCCGGCCCACGGAAGCCAT
GCAAGCGAAATACACCCCCCTGCCCAGCAAATCCAACCCGAACCCCCAGC
CCGACTGCGGTACCATCTACGTTGAATTCTGCCCGGACTCGACCGGCGTC
GGCACCAAGCAAGTGCGTACCTTCAACCACTTCGTCGACGAGAACAACTT
CCACACCGGCGTGTTCATCACCCAGACTCCGATCTCGCCATCCGCTGTGC
GCCTGCTGAGCAGCATGCCCGGCCGCATCTGCGAGCATTTCCAGGAGCAG
GATCTGCTGGTCAACATCACCCGCCACGAACTGGTCCCGAAACACGTCCT
GCTTAGCCCCGATGAGAAGGCTCGTTTGTTGGAACGCTACCGTCTGAAGG
AGTCGCAGTTGCCTCGTATACAGGTGTCTGATCCTGTTGCCAGATACCTG
GGTCTGCGCAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGTGAGACGGC
TGGTCGGTATGCCAGTTATCGGTGGGTTATATAAGGCTACGAGGTGACCG
AAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGAC
CCTCTAGGATACCCCGAATGGACGAGGACTACTCTGCAGGCTCCGTGGAC
GCCGACCGCGAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGA
GATGCTTTTGGATCGTCCGCAACAAGATGAAAATCAGCGCCCGGCCCACG
GAAGCCATGCAAGCGAAATACACCCCCCTGCCCAGCAAATCCAACCCGAA
CCCCCAGCCCGACTGCGGTACCATCTACGTTGAATTCTGCCCGGACTCGA
CCGGCGTCGGCACCAAGCAAGTGCGTACCTTCAACCACTTCGTCGACGAG
AACAACTTCCACACCGGCGTGTTCATCACCCAGACTCCGATCTCGCCATC
CGCTGTGCGCCTGCTGAGCAGCATGCCCGGCCGCATCTGCGAGCATTTCC
AGGAGCAGGATCTGCTGGTCAACATCACCCGCCACGAACTGGTCCCGAAA
CACGTCCTGCTTAGCCCCGATGAGAAGGCTCGTTTGTTGGAACGCTACCG
TCTGAAGGAGTCGCAGTTGCCTCGTATACAGGTGTCTGATCCTGTTGCCA
GATACCTGGGTCTGCGCAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGT
GAGACGGCTGGTCGGTATGCCAGTTATCGGTGGGTTATATAAGGCTACGA
GGTGACCGAAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAAT
ATTCCGACCCTCTAGGATACCCCGAATGGACGAGGACTACTCTGCAGGCT
CCGTGGACGCCGACCGCGAGATGACCAGGCTCTGGCGCACATGGCGGACA
GTCTTTGAGATGCTTTTGGATCGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264904 |
| DBxref | InterPro:IPR020609 |
| DBxref | InterPro:IPR020608 |
| DBxref | InterPro:IPR005571 |
| DBxref | InterPro:IPR000783 |
| DBxref | InterPro:IPR035913 |
| DBxref | InterPro:IPR036710 |
| DBxref | InterPro:IPR014381 |
| DBxref | PFAM:PF03871 |
| DBxref | PFAM:PF01191 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:2955316..2956688 - |
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