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ASPNIDRAFT_205782-T1, ASPNIDRAFT_205782-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205782-T1
Unique NameASPNIDRAFT_205782-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2163685..2165402+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205782-T1 ID=ASPNIDRAFT_205782-T1|Name=ASPNIDRAFT_205782-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1718bp|location=Sequence derived from alignment at ACJE01000004.1:2163685..2165402+ (Aspergillus niger ATCC 1015)
GTTGAGTCTAGTTTTCTGGTTCCTTCGACCTTATCAATCACTTCCAGAGG
TGCGTCTCAATAATCACACACACCAACGTCTCCCTCCCTCTCTCTCTCTG
CCCCACTCGTTGCAATTCTGCCCTTTCCTTAGCTAATCCGTGCCGGCCAG
CCCTTTTCCCCACCCCTCTTCGCCTCTCCGTCTGTCTGCCCAGAGATAAT
TCATTTAACCCCCCTCCTCGCTCTTCCGCCTTCTCTCTCTTTCCTCCCCT
CTTTCTTCTTCCTATATTTAAATATCCAATTCCTTCCCCCCCTTCAACAC
CGCCAATCTGTTTTCCTCCGCCTTTCGTCGTTTTCCCTTCTCCACCCTTC
GTTCCTCCCTTGGATTGACTGCCGCCGCCGCGTCGTCCCTGCAACAAAAC
TCCTCGCCCTCTGCCTCCGTCCTATCAAATAACCTCAAGGCGCCCCTGCG
CGTCAATTCCACTTCAACCTCCAGAATGGTGCACACCAACGTCGTTAGTA
AGTGGATCTTTTTCTCCCTTTGGGATATATATGGCAAGCAGAGGAGCATG
AAGGAAGAATCTAACCGGGATACATAGTCATCGGCTCCGGCCCCGCCGCC
CACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTCCTCTA
TGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCACCACCA
CCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCGGTGGA
GAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACGGAGGT
TATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTTCAAGC
TGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACACTGCT
GACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAACCTTCC
CGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGTCTGCG
ACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCGGTGGT
GGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGCAGCAG
CGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGCCATGG
CCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACTCCGTC
GCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACCCACCT
CAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGCCAACG
GTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCAAGGGT
CAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGTACCAG
CTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGACAAGC
GCTACCGCCAGGCCATCACCAGTGCCGGTAAGCTTTACTCAGTTCCGAAT
GTATGTCAATTGCAATCAACTAACTTTGACTCTCAGGATCCGGCTGCATT
GCCGCTCTCGAGGCCGAGAAGTACATCGCCGAGCGCGAGTCCGGCGAGGA
GCCCGCCACCTCCACCGAGAAGGCCGCTATCAAGCCTGCCACCCAGGAAG
TCAACGGTGAAGTCAAGCAGGACGCCCAGGGTGCCGCCGCCGAGTACAAG
TCCAACCCTCTGCTTTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2163685..2165402+

>ASPNIDRAFT_205782-T1 ID=ASPNIDRAFT_205782-T1|Name=ASPNIDRAFT_205782-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3312bp|location=Sequence derived from alignment at ACJE01000004.1:2163685..2165402+ (Aspergillus niger ATCC 1015)
ATGGTGCACACCAACGTCGTTATCATCGGCTCCGGCCCCGCCGCCCACAC
CGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTCCTCTATGAGG
GTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCACCACCACCACC
GACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCGGTGGAGAGCT
GATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACGGAGGTTATCA
CCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTTCAAGCTGTGG
ACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACACTGCTGACGC
CGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAACCTTCCCGGTG
AGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGTCTGCGACGGT
GCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCGGTGGTGGTGA
CTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGCAGCAGCGTCA
CTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGCCATGGCCAAC
CGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACTCCGTCGCTAC
TGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACCCACCTCAAGG
TCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGCCAACGGTCTC
TTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCAAGGGTCAGAT
CAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGTACCAGCTACA
CCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGACAAGCGCTAC
CGCCAGGCCATCACCAGTGCCGGATCCGGCTGCATTGCCGCTCTCGAGGC
CGAGAAGTACATCGCCGAGCGCGAGTCCGGCGAGGAGCCCGCCACCTCCA
CCGAGAAGGCCGCTATCAAGCCTGCCACCCAGGAAGTCAACGGTGAAGTC
AAGCAGGACGCCCAGGGTGCCGCCGCCGAGTACAAGTCCAACCCTCTGCT
TTAAATGGTGCACACCAACGTCGTTATCATCGGCTCCGGCCCCGCCGCCC
ACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTCCTCTAT
GAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCACCACCAC
CACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCGGTGGAG
AGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACGGAGGTT
ATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTTCAAGCT
GTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACACTGCTG
ACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAACCTTCCC
GGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGTCTGCGA
CGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCGGTGGTG
GTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGCAGCAGC
GTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGCCATGGC
CAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACTCCGTCG
CTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACCCACCTC
AAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGCCAACGG
TCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCAAGGGTC
AGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGTACCAGC
TACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGACAAGCG
CTACCGCCAGGCCATCACCAGTGCCGGATCCGGCTGCATTGCCGCTCTCG
AGGCCGAGAAGTACATCGCCGAGCGCGAGTCCGGCGAGGAGCCCGCCACC
TCCACCGAGAAGGCCGCTATCAAGCCTGCCACCCAGGAAGTCAACGGTGA
AGTCAAGCAGGACGCCCAGGGTGCCGCCGCCGAGTACAAGTCCAACCCTC
TGCTTTAAATGGTGCACACCAACGTCGTTATCATCGGCTCCGGCCCCGCC
GCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTCCT
CTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCACCA
CCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCGGT
GGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACGGA
GGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTTCA
AGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACACT
GCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAACCT
TCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGTCT
GCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCGGT
GGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGCAG
CAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGCCA
TGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACTCC
GTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACCCA
CCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGCCA
ACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCAAG
GGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGTAC
CAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGACA
AGCGCTACCGCCAGGCCATCACCAGTGCCGGATCCGGCTGCATTGCCGCT
CTCGAGGCCGAGAAGTACATCGCCGAGCGCGAGTCCGGCGAGGAGCCCGC
CACCTCCACCGAGAAGGCCGCTATCAAGCCTGCCACCCAGGAAGTCAACG
GTGAAGTCAAGCAGGACGCCCAGGGTGCCGCCGCCGAGTACAAGTCCAAC
CCTCTGCTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0019430removal of superoxide radicals
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0004791thioredoxin-disulfide reductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRR1ASPNIDRAFT_205782Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205782-T1ASPNIDRAFT_205782-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205782-T1.utr5p1ASPNIDRAFT_205782-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_205782-T1.utr5p2ASPNIDRAFT_205782-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205782-T1.exon1ASPNIDRAFT_205782-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205782-T1.exon2ASPNIDRAFT_205782-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205782-T1.exon3ASPNIDRAFT_205782-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205782-T1.exon4ASPNIDRAFT_205782-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205782-T1.cdsASPNIDRAFT_205782-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteBUSCO:EOG0926386D
DBxrefInterPro:IPR008255
DBxrefInterPro:IPR023753
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR005982
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF00070
Productthioredoxin-disulfide reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2163685..2165402 +
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