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ASPNIDRAFT_205870-T1, ASPNIDRAFT_205870-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205870-T1
Unique NameASPNIDRAFT_205870-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1883602..1884569+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205870-T1 ID=ASPNIDRAFT_205870-T1|Name=ASPNIDRAFT_205870-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=968bp|location=Sequence derived from alignment at ACJE01000004.1:1883602..1884569+ (Aspergillus niger ATCC 1015)
CAAACGTCTCCCTTACAACTCACTATTTCGCATTATTCATTTTCAACTTA
ACCCTGCCTCTTACCTGCACGATGGCAGCTAAAGTGCCCAGAAACTTCAG
ACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGGTAAGT
GCTATTCTACTTATAGTCATAGGAGACTCATTTCGTTGACATATTCCTAT
CGCTGTAACTTAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACGTTCGTC
CCACGCTTCCGACTCGCATCCATTATACTATACAATAGCATCACTGACAT
TATGAACGAGCGCAGAGTGTCCATGAGAACAGAATTTACAGCGTCAACAT
CCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTAT
CCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTAAGGATT
CGTTCTATTTCGACTGCTACTATATGGAAGATTCCAAGTCTGACTTCAAT
CTAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACT
ATACCATGGAAACTATTCTAGTCGAGCTCAGAAGGTAATCATGTCCTGAC
CTTCAGGCCATCGGTGACTTGATACTAATAGTTCCTAGATATATGGCTCT
GCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAA
TTGACGGTATCATGACTGGACGTGGATTCGAAAGCGGAGTATATGGTTGG
TTTCTAAGTCAGGTTCATCTGCATTTCTCTTCAATAGCTTATTAGAGCAT
GTACAGTCTATGCATAACGGCGGGCATGGCGCGGTCTTCTTTGAAGCCTA
GTTGCAATTCATCGAATTAGAACTTTGCTCAGTATGAACCATGTGCCACT
TTCAGCAGAATTCTACCT
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Coding sequence (CDS) from alignment at ACJE01000004.1:1883602..1884569+

>ASPNIDRAFT_205870-T1 ID=ASPNIDRAFT_205870-T1|Name=ASPNIDRAFT_205870-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2100bp|location=Sequence derived from alignment at ACJE01000004.1:1883602..1884569+ (Aspergillus niger ATCC 1015)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATG
GTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCT
CACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCC
GGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACT
TGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCC
TGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGA
GCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTC
CGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGA
CTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATG
CTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACG
GAACTATTCTTGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGC
GTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCA
ATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGG
TCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACC
ATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCA
CAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTA
AAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAG
GGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACAGTGTCC
ATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCC
GACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGT
TGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTC
AGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGA
TATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTC
GAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAG
AGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGT
CTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCT
TGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCC
ATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCC
CGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTAC
CAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTA
TTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTT
CCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAG
AAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAG
CTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGT
AACTGGAACGGAACTATTCTTGGCCCCCCTCACAGTGTCCATGAGAACAG
AATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCC
CTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGG
AGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCG
CGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTC
TGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPM2ASPNIDRAFT_205870Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205870-T1ASPNIDRAFT_205870-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205870-T1.utr5p1ASPNIDRAFT_205870-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205870-T1.exon1ASPNIDRAFT_205870-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205870-T1.exon2ASPNIDRAFT_205870-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205870-T1.exon3ASPNIDRAFT_205870-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205870-T1.exon4ASPNIDRAFT_205870-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205870-T1.exon5ASPNIDRAFT_205870-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205870-T1.exon6ASPNIDRAFT_205870-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205870-T1.cdsASPNIDRAFT_205870-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205870-T1.utr3p1ASPNIDRAFT_205870-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_205870-T1.utr3p2ASPNIDRAFT_205870-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264UD3
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme spm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1883602..1884569 +
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