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ASPNIDRAFT_206141-T1, ASPNIDRAFT_206141-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206141-T1
Unique NameASPNIDRAFT_206141-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1119789..1121691+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206141-T1 ID=ASPNIDRAFT_206141-T1|Name=ASPNIDRAFT_206141-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1903bp|location=Sequence derived from alignment at ACJE01000004.1:1119789..1121691+ (Aspergillus niger ATCC 1015)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATTTCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:1119789..1121691+

>ASPNIDRAFT_206141-T1 ID=ASPNIDRAFT_206141-T1|Name=ASPNIDRAFT_206141-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3690bp|location=Sequence derived from alignment at ACJE01000004.1:1119789..1121691+ (Aspergillus niger ATCC 1015)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGG
ACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAG
CGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGC
TGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCA
ATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTT
GTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCA
GCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTA
TCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGC
CAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGAT
TCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAA
ATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGC
CAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAA
CGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTG
CACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAG
GGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAG
CCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACA
CTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGT
CGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGG
ACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAG
CATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGT
ATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTC
GGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGC
CGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGG
CTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAA
ATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCG
TCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTTACATAAAC
TCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTTTGAATGGC
CAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCA
GTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGT
GCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCAT
CCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACA
ACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATT
GATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCA
GGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCA
GCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACT
CAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAG
CCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGATG
CCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGC
TCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAA
CTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTG
CGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCT
CCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGC
ACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTC
CGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCC
CGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGAC
TCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTG
CCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCC
AGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCA
GCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGA
CTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTT
GATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAA
GAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGG
GCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAG
CAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCG
CTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTG
GTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATAT
GACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGG
GCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAG
TGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCG
GAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAG
ATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGA
CGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAAT
GCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTTACATAAACTCTCC
AAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043488regulation of mRNA stability
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VTS1ASPNIDRAFT_206141Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206141-T1.exon1ASPNIDRAFT_206141-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206141-T1.exon2ASPNIDRAFT_206141-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206141-T1.cdsASPNIDRAFT_206141-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206141-T1ASPNIDRAFT_206141-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR037635
DBxrefInterPro:IPR013761
DBxrefInterPro:IPR001660
DBxrefPFAM:PF07647
ProductFlap-structured DNA-binding and RNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1119789..1121691 +
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