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ASPNIDRAFT_206769-T1, ASPNIDRAFT_206769-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206769-T1
Unique NameASPNIDRAFT_206769-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1310686..1311819-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206769-T1 ID=ASPNIDRAFT_206769-T1|Name=ASPNIDRAFT_206769-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1134bp|location=Sequence derived from alignment at ACJE01000010.1:1310686..1311819- (Aspergillus niger ATCC 1015)
GCTCATATCACAATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGC
TGCAGCTGCGGACCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCG
CAAAGGCGAGTCAGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCG
CAAGACGACGATTCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCA
CAGAATAAAGCGCAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCAT
CTGCGACTACCAAGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGG
GATGGCAAAGTCCAGCTTGCGGATACGAACGACGCCACAAAACACGTCGA
CTGGTTTGACGAGGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTG
CCTCGAATGAGCCGCAGATGCCGGATGGCACATATAGGGGACTGGCGAAC
CAGACGTCATTCATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGG
ACCGATCAAGGCAGCGACCAATATCCGTACTATAACAGTGACGGACTACT
CTCCAGATGTGTGCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGT
GATAATTGGTGAGTGCCGTCGCCCCTTTCACCCGACATACACATTTGCCA
CTCAATAGGGAGCAGCTTATCTAATTGAAGCATACGCTAACTATTATTGT
ACAGTAAATTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTG
GATCGAGAGTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGT
GGTTGCGAGTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAG
AGGCCATGCTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCA
TACAGGGAGCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTG
TGCTCTGCAAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCG
CCACGAATGGATTATTCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAG
CGCAAGAGGGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGG
TGAGGAAGTGAGTGACGAGGAAGACGAAGAATGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:1310686..1311819-

>ASPNIDRAFT_206769-T1 ID=ASPNIDRAFT_206769-T1|Name=ASPNIDRAFT_206769-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2052bp|location=Sequence derived from alignment at ACJE01000010.1:1310686..1311819- (Aspergillus niger ATCC 1015)
TAAATTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATC
GAGAGTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTT
GCGAGTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGC
CATGCTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACA
GGGAGCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCT
CTGCAAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCAC
GAATGGATTATTCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAGCGCA
AGAGGGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAG
GAAGTGAGTGACGAGGAAGACGAAGAATGAATGGCTGAGACGACAAATGA
TACAGCTGCAACTGCAGCTGCAGCTGCGGACCCCCAACCGCCGGTTGTCA
CATTCAAAAAGCGCGGCGCAAAGGCGAGTCAGAACATCCGCAAAAGACCA
GCACCGCCTCCCGTATCGCAAGACGACGATTCTTCCGACTTTTCCTCCTC
TGAAGACGAATCGGGTCACAGAATAAAGCGCAGAAAGAACAAGGGTGCTG
GGGTTGTCTCTGCTTCATCTGCGACTACCAAGCCTGTCGATCGGGAACCT
GCGGCCACCGCCACCGGGGATGGCAAAGTCCAGCTTGCGGATACGAACGA
CGCCACAAAACACGTCGACTGGTTTGACGAGGATTCTAAGGATGCGCGCT
CATCGAAACCGCAATCTGCCTCGAATGAGCCGCAGATGCCGGATGGCACA
TATAGGGGACTGGCGAACCAGACGTCATTCATCAAGAAGAATCCGAATGC
GCCGAACAGGTCATTCGGACCGATCAAGGCAGCGACCAATATCCGTACTA
TAACAGTGACGGACTACTCTCCAGATGTGTGCAAGGACTACAAGCAGACT
GGATTCTGTGGTTTCGGTGATAATTGTAAATTCCTTCACGATCGAAGCGA
CTACAAACAAGGATGGGAACTGGATCGAGAGTGGGAGACCGTCACCAAGG
GCAAACAATTGAAGGGAACAGTGGTTGCGAGTGCCGATCGGACAACGACG
GAGAATAAAGACGACGATGAAGAGGCCATGCTGGAAGACATCCCGTTTGC
CTGTTTTATCTGCAAGGGGCCATACAGGGAGCCGATCGTCACGAAATGCG
GTCACTACTTCTGCGAGCAGTGTGCTCTGCAAAGATACAGGAAGGACCCA
AGCTGCGCAGCCTGTGGATCCGCCACGAATGGATTATTCAGTTCGGCCAA
GAGATTGAAAAAGCTGCTAGAGCGCAAGAGGGAACTTGCGGCGAAGAGGA
GACAAGAGGCTATCGAAGCTGGTGAGGAAGTGAGTGACGAGGAAGACGAA
GAATGAATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGC
TGCGGACCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGG
CGAGTCAGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGAC
GACGATTCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAAT
AAAGCGCAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGA
CTACCAAGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGC
AAAGTCCAGCTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTT
TGACGAGGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGA
ATGAGCCGCAGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACG
TCATTCATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGAT
CAAGGCAGCGACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAG
ATGTGTGCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAAT
TG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC24ASPNIDRAFT_206769Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206769-T1ASPNIDRAFT_206769-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206769-T1.cdsASPNIDRAFT_206769-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206769-T1.exon2ASPNIDRAFT_206769-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206769-T1.exon1ASPNIDRAFT_206769-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206769-T1.utr5p1ASPNIDRAFT_206769-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13445
DBxrefPFAM:PF00642
DBxrefPFAM:PF13920
DBxrefPFAM:PF13923
DBxrefPFAM:PF00097
ProductRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1310686..1311819 -
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