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ASPNIDRAFT_206952-T1, ASPNIDRAFT_206952-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206952-T1
Unique NameASPNIDRAFT_206952-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1787677..1790784-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206952-T1 ID=ASPNIDRAFT_206952-T1|Name=ASPNIDRAFT_206952-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=3108bp|location=Sequence derived from alignment at ACJE01000010.1:1787677..1790784- (Aspergillus niger ATCC 1015)
ATGGTTTCGGCGTGACAGACAGTCGAGTCCAAATAGGCATAGCCTCGCCC
GACGGCCACTCGACCGCCTCCCCTCTTTCTTTTTCCCCCTAAATAATCTC
CCTGTCGAAGCCCGGACTACGTCACAACTTTTTCCTTTCCTTTCCCCTTC
CTCTCCAACACGATCTACTTCTGAACTGCCGTGTACTCGCTCAGTGACCT
TTGGGTACAGGCGTTTGCGCTGCAGTATAGCCAGCTCCCGAAGCATCAAC
AACTTGTCGCATTCTACTAACTTCAATCAACCAGCTTTGCCTCCTTTTAA
CTTGCTTCCCTTTCCCGTACCCCTCCAGTTGTTTTCTTGTTCAGCGTCCG
TCCCGTCCTTATTCTTCTTCGTGTCCTCGCCACCTCCGTCCGCTCGCTTG
GCTATTTTTTTCCTTACATCCCCGGGGTCACCTGTCGACCTCCCTCGCTC
TGATATATCGACACCACCAACAATTATCCCCCTCCTCCTTTCTTCGCTAT
TATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATA
CCGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGAC
GAAGGTGAGTGTTGTGCATCTTTATGAAAAAACTGTTTCGATCCTTCGTT
TTGCGCGCGTGGAACTCTGGTACCTCCCATGCCCCAAACTCCCGAATATC
TGCTGTATCTTGCACTTCCTTACTTCATCATCGACCCTTGACCTGTTCTG
GCTTGGTTGTACGCCACTGTTCCCCCAAATGTTCTGTTGACTACCCGCCG
CCGTCGGGATGACCTCACAATTGGCGTCATCGATGGGGGGTCACTGTTAT
CAGATCCCCTTCCTCTCAGACTTCGGCCTGGACCGCCTCATTTGGCCAAC
CTCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTCAT
CATCGTCATTGTTATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACAT
TTGCTCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACC
AAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGC
CATAACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACC
CTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGT
TCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACT
TACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCT
GGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGC
CCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTAC
CCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGT
CTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCTG
CAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCT
TAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTT
CCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAAC
CCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGC
TAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGT
TCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAAT
GACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAA
TGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTG
AGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCACA
AAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAA
GGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGC
CTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGA
AAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAA
CTTTCTCGAGAGGAACAGGTAAGAAGCGCTTTTTACCATTTGGTGCGTTC
AAGTTATTGGCTTGGTGCTAACGTTCTTTGTAGGGTTGCGGCGCTCAAGT
GTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAA
TTGTTCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCG
TGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCC
CAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCG
GCAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCA
ACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAATGAGTCCCCA
TGCGAGGCCACGATAATACATGATTGGTCGTGTTCCGTTATATGCGGTTG
AAGAACGGCCGATATTCTTTAAATTCTTTTTCTTGCTTCAGGAGTGCAGG
CGTCAACGTGAGGATGTGTGGCGCCTTGTCTGCCTGCTACCTCTTGCTCT
TATTATTTGGCTACGCGCCACCGGCATGGATAGGTGTTATGATGTATACG
ATTTCTAAAACGGACGGCTGAATTTGAAGTGGATTGGGCATCACTTGATC
ACCAGAAGGTGCAAACTTGGCGCAAAAGCTTGGCTGCTTTCAATTTCTTT
TTATCACTTGTTCTCTCTTTTTTTTTTTCGCTTCGACCCTCAAGAGCCCT
CGTCCTGTCTGGCATCGGTACTTGCAGGCTAGGGTGGTGTATTGTGTACT
CATTTATCTTTTGCTTTCTCTTTTTACACTGCTATCCCCTTTGCTGTGAG
GGCTTCTCTTCGTCTGTCTGATACTTGCGGGCCACTGGGTGTTTGCCTTC
TCTATCATTTTGTTGCTGCGAAACACGGTACTGGGTGGCGTACTGGAGGC
TTCTTGCT
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Coding sequence (CDS) from alignment at ACJE01000010.1:1787677..1790784-

>ASPNIDRAFT_206952-T1 ID=ASPNIDRAFT_206952-T1|Name=ASPNIDRAFT_206952-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4707bp|location=Sequence derived from alignment at ACJE01000010.1:1787677..1790784- (Aspergillus niger ATCC 1015)
GGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACC
TTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTTACCGCC
ACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCT
TGCGCATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCA
TGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAACATCCCT
AACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACG
ACGGTAAACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGA
TGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAA
GCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCT
CTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGG
CGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTC
CTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAAC
TCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGG
CACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACG
AGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTT
CCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGG
TGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTG
CCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCT
GATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGC
AGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGC
TTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTA
TCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCA
ACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTAT
CAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACG
AAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAG
CACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAA
ACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCC
GATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTC
GACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCG
AGAGGAACAGATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAA
CTAATCATACCGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCG
GGTCTAGACGAAGGTGAGTGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAG
AAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGA
GAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCA
ATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCC
CAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGATGC
GCATCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTA
TCCCTGCTCAGGGGCTACGACGGTAAACTCCCGGGCGACCTCTTCGGATC
TTAAAGATACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCT
CCGCGACCAGCCATAACAAGCGCGACTGATACCCCCGATTACTTCAACTC
CGTCCACAACCCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCG
GCAGTGGTGGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCT
GTTGCAGCACTTACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGG
CGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTA
TGCTCGCCGGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGG
GGCTTCCCTACCCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGG
CGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCC
TGCAGCAGCTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCAC
CGTACTGCTCTTAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTC
TAACCCCACTTCCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATA
TTAAGCCGAACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCT
GCTGATGCGGCTAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAA
CCCCAATCAGTTCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTA
TTCAGGCCAATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCG
CAAAACATGAATGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGA
CATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGA
ACACTGGCACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAA
GATGCACCTAAGGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGG
TAGTGTTGAGCCTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATG
ATATGAAGAGAAAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAG
AAGAGAAAGAACTTTCTCGAGAGGAACAGATGTCTGCGGCTGTTACTTCG
ACCGTTTCGACCAGTCTAACTAATCATACCGATACTCGTAATTCTACCCC
AATGGATGCGAAAAAGGCGGGTCTAGACGAAGGTGAGTGGTTGCGGCGCT
CAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGG
TGGAATTGTTCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAG
CTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAAGA
CTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCA
TGTCGGCAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCA
ATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAAACTCC
CGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGATCCTCA
AACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTGATA
CCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCAAT
CCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACACCCGG
AAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGG
GCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCC
GGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGCGATTA
TTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCC
GCACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGC
CCCAACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGGTGGTGCGACACC
GTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAAGAAGAACA
GCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGACG
CAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCAGGTTCCGACCC
ATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGCTGG
CCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAGCA
TCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGATGCTGG
CGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAGAGA
CCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTGCC
AAGGGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAGCACCGCAGCAAA
CAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAAGAAGGCCA
AAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGGGAT
TCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACAGACACGAA
GAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAACAGAT
GTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATACCG
ATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACGAA
GGTGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952ASPNIDRAFT_206952Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952-T1ASPNIDRAFT_206952-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952-T1.cdsASPNIDRAFT_206952-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952-T1.utr3p1ASPNIDRAFT_206952-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952-T1.exon3ASPNIDRAFT_206952-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206952-T1.exon2ASPNIDRAFT_206952-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206952-T1.exon1ASPNIDRAFT_206952-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206952-T1.utr5p1ASPNIDRAFT_206952-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021755
DBxrefInterPro:IPR021756
DBxrefInterPro:IPR020956
DBxrefInterPro:IPR004827
DBxrefInterPro:IPR002112
DBxrefPFAM:PF07716
DBxrefPFAM:PF00170
DBxrefPFAM:PF11785
DBxrefPFAM:PF11787
DBxrefPFAM:PF11786
ProductbZIP transcription factor AtfA
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1787677..1790784 -
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