You are here

Home

ASPNIDRAFT_206990-T1, ASPNIDRAFT_206990-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206990-T1
Unique NameASPNIDRAFT_206990-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1864858..1866295+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206990-T1 ID=ASPNIDRAFT_206990-T1|Name=ASPNIDRAFT_206990-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1438bp|location=Sequence derived from alignment at ACJE01000010.1:1864858..1866295+ (Aspergillus niger ATCC 1015)
GCTTCCTCCCATACAATTCTCTCTCCCATACAAAAAAGTACTGCATATAC
CGCACTGGTGGGTTCCCTAATAAACATTCCGCTCTTCAGCATTGTCTCTA
CAACACCAACACAATCTTTTTTTCTCTTTCAACAGAGTTGATTTCCTTTT
TCACAAGCTGCTTCTGATCATCTGTTTCCCTTGATTTTCTCTCATCCTGG
TTGCGCGACCTCGCTGTCGCGCCTCTGCTACAGCCATCATATAGTTCTAG
TAGCAGTGAGCTGACCCAAGCTGTCTTATCCTCCACAGGTCAAATTTGCG
ACCTTCAAATCCACAACTTCGCGTTCTTTCAGAGTCAATTATTGAGTAAG
TTGCTCTCCTGCGCGCCTTTCCCCTCTTGGTGTCATTTGACTTGCGACCG
CGATCCCTCTTGTTTGGGCGCGCGCAAACGGCTTATCCGCACCTCCAACC
ACCACTTGCACTGCGCACTCTGTCGCATCACTTCCTGTGCTCTTTAATCC
TCATATTGTTGTCGCTGTCCTTTTTTCCTGCTACTTTTGGTGTCAACTGG
GTCACTCCCTGCTTGACTTCTGGATCATTCTGCCTACATCACTCAAAGCC
AACTTCCAAGTACTAACGATCGCATAGAGCTCAATAATCAAAATGCCCAA
GGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCGCAGAAAGA
AGGGTATGTATGCCTTGCTCTATCTTCGGAACTCATGCTAATGCATAGCT
CAGACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCC
AACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCGG
TAAGTCACTTCTGGACCTTGAATGGGAATGTAGGCGTCTAACTTCATGCA
GGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACAC
TGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACG
AAGACGAGAAGGCCAGCTACAACGTAAGTTGACACTCCTGCCGTTTCTTT
GTCAGCCAATGCTAATGAACTTTGAACAGGCGGCTGCTGAGGAGGACGAG
GAATCATCCTAAGGGTTTCCCTCTCTTCATGGGTCTTGTGTGTCTGGCCG
ATTGGCGTTTTTCGTGTCGTTTATTCCGCTGATTGTCTGCCTTGTAATTG
ATGCTTCTTATATTTTCTCTTTATCTACTCAACGGCTTCTGGTATGGGAT
GATGGCGGTAACTCTTGATTTTCTGTTATGAAGGATTCTCGATGGGAAAT
TTTTACTGTACGGACTGGCGGCTTTGGGACGAATTTGACTTGAAGAGGTG
CCCGGCGCTGAATTTCAGAACGACGGGAAAACCTTGCGAGTACCTATGGT
GAAATATGAATTGAAGCTGCAGAAGTGATGTTAGGCGA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1864858..1866295+

>ASPNIDRAFT_206990-T1 ID=ASPNIDRAFT_206990-T1|Name=ASPNIDRAFT_206990-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1248bp|location=Sequence derived from alignment at ACJE01000010.1:1864858..1866295+ (Aspergillus niger ATCC 1015)
ATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCG
CAGAAAGAAGGACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGT
TCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATC
TCTTTCGGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAG
CGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGC
GTTACGAAGACGAGAAGGCCAGCTACAACGCGGCTGCTGAGGAGGACGAG
GAATCATCCTAAATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCG
TGGCACTGAGCGCAGAAAGAAGGACCCCAACGCTCCCAAGCGTGGTCTCT
CTGCCTACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAG
AACCCTGGCATCTCTTTCGGCCAAGTCGGCAAGATGCTCGGAGAGCGGTG
GAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCG
CTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCTACAACGCGGCTGCT
GAGGAGGACGAGGAATCATCCTAAATGCCCAAGGAGAAGACCACCCGCAA
GACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGGACCCCAACGCTCCCA
AGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAACGACAACCGTGAGAAG
GTTCGCGAGGAGAACCCTGGCATCTCTTTCGGCCAAGTCGGCAAGATGCT
CGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGAGG
AGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCTAC
AACGCGGCTGCTGAGGAGGACGAGGAATCATCCTAAATGCCCAAGGAGAA
GACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGGACC
CCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAACGAC
AACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCGGCCAAGT
CGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCGTC
GCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACGAG
AAGGCCAGCTACAACGCGGCTGCTGAGGAGGACGAGGAATCATCCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NHP6ASPNIDRAFT_206990Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206990-T1ASPNIDRAFT_206990-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206990-T1.utr5p1ASPNIDRAFT_206990-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_206990-T1.utr5p2ASPNIDRAFT_206990-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_206990-T1.utr5p3ASPNIDRAFT_206990-T1.utr5p3Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206990-T1.exon1ASPNIDRAFT_206990-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206990-T1.exon2ASPNIDRAFT_206990-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206990-T1.exon3ASPNIDRAFT_206990-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206990-T1.exon4ASPNIDRAFT_206990-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206990-T1.exon5ASPNIDRAFT_206990-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206990-T1.exon6ASPNIDRAFT_206990-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206990-T1.cdsASPNIDRAFT_206990-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206990-T1.utr3p1ASPNIDRAFT_206990-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductNon-histone chromosomal protein 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1864858..1866295 +
Powered by Drupal