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ASPNIDRAFT_207376-T1, ASPNIDRAFT_207376-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207376-T1
Unique NameASPNIDRAFT_207376-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3132571..3133899-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207376-T1 ID=ASPNIDRAFT_207376-T1|Name=ASPNIDRAFT_207376-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1329bp|location=Sequence derived from alignment at ACJE01000010.1:3132571..3133899- (Aspergillus niger ATCC 1015)
AGGACATATACCTCTGATTCAGCATCTTCTCTCCCTCCGTCGCCTTACCC
AGATTCACAGCTTGATCGGCCCAAAATGCGGCCTATTTTGCTCTCCGGCC
ATGTGCGTTTCGCCTATACCCACCCCCGAACGCGATGATGGTCGCCCAGG
AGCTAGGAACATGATATGAAAATCGGGAAATAAAAGGGAATAAGGACGGG
TCGCTGATTGATTTTTTGCTTAATAGGAACGGTCTCTGAACCAAATCAAG
TTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTGT
GTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGAC
ACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCTG
GCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCGG
CGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCAAGCGGGTCGAGT
TCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAGAAGCGTATGGGT
TTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGAC
GGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAGG
CAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCAC
GAAGACGGCAGTGTCAGCCAGTACGATGGAAAGGTGCGGAGAAATGCTTG
TGTTTTGTTATGCATTTGGGGCTAGATGCTAACTGGGTGATGACAGACCG
GTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAAC
GACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGA
CAAGTCCGCCAAGGTACATAAGCCTGCTACTATGCATGTCAAACGATTTT
AAATGCTAACTCAACCCAGCTCATGTCTACCCGTAACCTCGCCATCCTCA
AAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAG
AAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCAC
GACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCT
TCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACG
GTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGG
TTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACG
AGGTCGAGCGCGAGCAGCTGAGGAAGTGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:3132571..3133899-

>ASPNIDRAFT_207376-T1 ID=ASPNIDRAFT_207376-T1|Name=ASPNIDRAFT_207376-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4044bp|location=Sequence derived from alignment at ACJE01000010.1:3132571..3133899- (Aspergillus niger ATCC 1015)
CTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACAC
TCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGG
GAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGT
AAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCG
TGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCG
GTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCAC
TTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCT
GAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCG
ACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATC
ACTGCCTCCAAGGACAAGTCCGCCAAGGAACGGTCTCTGAACCAAATCAA
GTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTG
TGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGA
CACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCT
GGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCG
GCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCAAGCGGGTCGAG
TTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAGAAGCGTATGGG
TTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGA
CGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAG
GCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCA
CGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGATGCGGCCTATTTTGC
TCTCCGGCCATCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTAT
GTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTA
CGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGG
CCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGAC
GAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACAT
CCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCC
GTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAG
CGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGC
CCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCA
CCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGAACGGTCTCTG
AACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAA
GGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTA
CCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAAC
ACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAA
CGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCA
AGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAG
AAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGG
CGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCA
CAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATC
ATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGATGCG
GCCTATTTTGCTCTCCGGCCATCTCATGTCTACCCGTAACCTCGCCATCC
TCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCC
AAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCAC
CACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGG
TCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAAC
ACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGA
CGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGT
ACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAG
AACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTC
CGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGG
AACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTC
TCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGA
GCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATG
TGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTG
CGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCC
TACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGG
CTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGAT
ATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCG
CATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGG
GCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGAT
GGAAAGATGCGGCCTATTTTGCTCTCCGGCCATCTCATGTCTACCCGTAA
CCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCA
CCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCC
ATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTT
CTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCG
GTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCT
GGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTT
CGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTG
AGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGAC
ATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAA
GTCCGCCAAGGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCG
ATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCG
GCCAACGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTG
GACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAG
ACAACACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTG
TGGGACTTCCCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAG
CAGACTGTTGGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTG
CGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAG
CCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTG
GAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCA
GCCAGTACGATGGAAAGATGCGGCCTATTTTGCTCTCCGGCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF34ASPNIDRAFT_207376Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207376-T1ASPNIDRAFT_207376-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207376-T1.cdsASPNIDRAFT_207376-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207376-T1.exon4ASPNIDRAFT_207376-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207376-T1.exon3ASPNIDRAFT_207376-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207376-T1.exon2ASPNIDRAFT_207376-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207376-T1.exon1ASPNIDRAFT_207376-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207376-T1.utr5p1ASPNIDRAFT_207376-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262W7C
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR027525
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producttranslation initiation factor eIF3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3132571..3133899 -
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